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1.5.0-DEV-6a9a92683d.log
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Julia Version 1.5.0-DEV.299
Commit 6a9a92683d (2020-02-20 07:47 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-9.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed IntelOpenMP_jll ───────────── v2018.0.3+0
Installed MKL_jll ───────────────────── v2019.0.117+2
Installed Compat ────────────────────── v2.2.0
Installed IterTools ─────────────────── v1.3.0
Installed DynamicalSystemsBase ──────── v1.5.2
Installed ChaosTools ────────────────── v1.9.0
Installed ForwardDiff ───────────────── v0.10.9
Installed DiffEqBase ────────────────── v6.16.0
Installed ZygoteRules ───────────────── v0.2.0
Installed FunctionWrappers ──────────── v1.0.0
Installed RecursiveFactorization ────── v0.1.0
Installed Combinatorics ─────────────── v1.0.0
Installed BinaryProvider ────────────── v0.5.8
Installed OrderedCollections ────────── v1.1.0
Installed StatsFuns ─────────────────── v0.9.4
Installed DocStringExtensions ───────── v0.8.1
Installed FFTW_jll ──────────────────── v3.3.9+3
Installed AbstractFFTs ──────────────── v0.5.0
Installed DelayEmbeddings ───────────── v1.3.1
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed Arpack ────────────────────── v0.4.0
Installed Measurements ──────────────── v2.2.0
Installed StatsBase ─────────────────── v0.32.1
Installed Distributions ─────────────── v0.22.4
Installed SortingAlgorithms ─────────── v0.3.1
Installed Roots ─────────────────────── v0.8.4
Installed TableTraits ───────────────── v1.0.0
Installed NearestNeighbors ──────────── v0.4.4
Installed PDMats ────────────────────── v0.9.11
Installed TreeViews ─────────────────── v0.3.0
Installed RecipesBase ───────────────── v0.7.0
Installed DiffRules ─────────────────── v1.0.1
Installed QuadGK ────────────────────── v2.3.1
Installed Parameters ────────────────── v0.12.0
Installed IterativeSolvers ──────────── v0.8.1
Installed NaNMath ───────────────────── v0.3.3
Installed OpenBLAS_jll ──────────────── v0.3.7+5
Installed DSP ───────────────────────── v0.6.3
Installed SimpleDiffEq ──────────────── v1.1.0
Installed Arpack_jll ────────────────── v3.5.0+2
Installed OpenSpecFun_jll ───────────── v0.5.3+1
Installed ArrayInterface ────────────── v2.4.1
Installed MuladdMacro ───────────────── v0.2.2
Installed Reexport ──────────────────── v0.2.0
Installed Polynomials ───────────────── v0.6.0
Installed StaticArrays ──────────────── v0.12.1
Installed FFTW ──────────────────────── v1.2.0
Installed Missings ──────────────────── v0.4.3
Installed DiffResults ───────────────── v1.0.2
Installed LombScargle ───────────────── v0.5.0
Installed SpecialFunctions ──────────── v0.9.0
Installed DataStructures ────────────── v0.17.9
Installed ChainRulesCore ────────────── v0.6.1
Installed Distances ─────────────────── v0.8.2
Installed DataAPI ───────────────────── v1.1.0
Installed Requires ──────────────────── v1.0.1
Installed Rmath ─────────────────────── v0.6.0
Installed RecursiveArrayTools ───────── v2.1.0
Installed FillArrays ────────────────── v0.8.4
Installed Calculus ──────────────────── v0.5.1
Installed CommonSubexpressions ──────── v0.2.0
Installed MacroTools ────────────────── v0.5.4
#=#=# ######### 13.8%######################################################################## 100.0%
#=#=# ### 4.4%######################## 34.3%##################################################### 74.5%######################################################################## 100.0%
#=#=# ##O#- # 0.1%## 2.9%##### 7.3%######### 13.1%############## 19.6%#################### 29.0%############################ 39.3%############################## 42.6%######################################## 55.9%###################################################### 75.2%################################################################### 94.4%######################################################################## 100.0%
#=#=# ############### 21.8%######################################################################## 100.0%
#=#=# ######################################################################## 100.0%
Updating `~/.julia/environments/v1.5/Project.toml`
[608a59af] + ChaosTools v1.9.0
Updating `~/.julia/environments/v1.5/Manifest.toml`
[621f4979] + AbstractFFTs v0.5.0
[7d9fca2a] + Arpack v0.4.0
[68821587] + Arpack_jll v3.5.0+2
[4fba245c] + ArrayInterface v2.4.1
[b99e7846] + BinaryProvider v0.5.8
[49dc2e85] + Calculus v0.5.1
[d360d2e6] + ChainRulesCore v0.6.1
[608a59af] + ChaosTools v1.9.0
[861a8166] + Combinatorics v1.0.0
[bbf7d656] + CommonSubexpressions v0.2.0
[34da2185] + Compat v2.2.0
[717857b8] + DSP v0.6.3
[9a962f9c] + DataAPI v1.1.0
[864edb3b] + DataStructures v0.17.9
[5732040d] + DelayEmbeddings v1.3.1
[2b5f629d] + DiffEqBase v6.16.0
[163ba53b] + DiffResults v1.0.2
[b552c78f] + DiffRules v1.0.1
[b4f34e82] + Distances v0.8.2
[31c24e10] + Distributions v0.22.4
[ffbed154] + DocStringExtensions v0.8.1
[6e36e845] + DynamicalSystemsBase v1.5.2
[7a1cc6ca] + FFTW v1.2.0
[f5851436] + FFTW_jll v3.3.9+3
[1a297f60] + FillArrays v0.8.4
[f6369f11] + ForwardDiff v0.10.9
[069b7b12] + FunctionWrappers v1.0.0
[1d5cc7b8] + IntelOpenMP_jll v2018.0.3+0
[c8e1da08] + IterTools v1.3.0
[42fd0dbc] + IterativeSolvers v0.8.1
[82899510] + IteratorInterfaceExtensions v1.0.0
[fc60dff9] + LombScargle v0.5.0
[856f044c] + MKL_jll v2019.0.117+2
[1914dd2f] + MacroTools v0.5.4
[eff96d63] + Measurements v2.2.0
[e1d29d7a] + Missings v0.4.3
[46d2c3a1] + MuladdMacro v0.2.2
[77ba4419] + NaNMath v0.3.3
[b8a86587] + NearestNeighbors v0.4.4
[4536629a] + OpenBLAS_jll v0.3.7+5
[efe28fd5] + OpenSpecFun_jll v0.5.3+1
[bac558e1] + OrderedCollections v1.1.0
[90014a1f] + PDMats v0.9.11
[d96e819e] + Parameters v0.12.0
[f27b6e38] + Polynomials v0.6.0
[1fd47b50] + QuadGK v2.3.1
[3cdcf5f2] + RecipesBase v0.7.0
[731186ca] + RecursiveArrayTools v2.1.0
[f2c3362d] + RecursiveFactorization v0.1.0
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v1.0.1
[79098fc4] + Rmath v0.6.0
[f2b01f46] + Roots v0.8.4
[05bca326] + SimpleDiffEq v1.1.0
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.9.0
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.1
[4c63d2b9] + StatsFuns v0.9.4
[3783bdb8] + TableTraits v1.0.0
[a2a6695c] + TreeViews v0.3.0
[700de1a5] + ZygoteRules v0.2.0
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building FFTW ─→ `~/.julia/packages/FFTW/qqcBj/deps/build.log`
Building Rmath → `~/.julia/packages/Rmath/BoBag/deps/build.log`
Testing ChaosTools
Status `/tmp/jl_VJmNfk/Manifest.toml`
[621f4979] AbstractFFTs v0.5.0
[79e6a3ab] Adapt v1.0.1
[ec485272] ArnoldiMethod v0.0.4
[7d9fca2a] Arpack v0.4.0
[68821587] Arpack_jll v3.5.0+2
[4fba245c] ArrayInterface v2.4.1
[b99e7846] BinaryProvider v0.5.8
[49dc2e85] Calculus v0.5.1
[d360d2e6] ChainRulesCore v0.6.1
[608a59af] ChaosTools v1.9.0
[861a8166] Combinatorics v1.0.0
[bbf7d656] CommonSubexpressions v0.2.0
[34da2185] Compat v2.2.0
[717857b8] DSP v0.6.3
[9a962f9c] DataAPI v1.1.0
[864edb3b] DataStructures v0.17.9
[5732040d] DelayEmbeddings v1.3.1
[2b5f629d] DiffEqBase v6.16.0
[163ba53b] DiffResults v1.0.2
[b552c78f] DiffRules v1.0.1
[b4f34e82] Distances v0.8.2
[31c24e10] Distributions v0.22.4
[ffbed154] DocStringExtensions v0.8.1
[6e36e845] DynamicalSystemsBase v1.5.2
[d4d017d3] ExponentialUtilities v1.6.0
[7a1cc6ca] FFTW v1.2.0
[f5851436] FFTW_jll v3.3.9+3
[1a297f60] FillArrays v0.8.4
[6a86dc24] FiniteDiff v2.2.1
[f6369f11] ForwardDiff v0.10.9
[069b7b12] FunctionWrappers v1.0.0
[01680d73] GenericSVD v0.2.2
[d25df0c9] Inflate v0.1.1
[1d5cc7b8] IntelOpenMP_jll v2018.0.3+0
[c8e1da08] IterTools v1.3.0
[42fd0dbc] IterativeSolvers v0.8.1
[82899510] IteratorInterfaceExtensions v1.0.0
[093fc24a] LightGraphs v1.3.0
[fc60dff9] LombScargle v0.5.0
[2fda8390] LsqFit v0.10.0
[856f044c] MKL_jll v2019.0.117+2
[1914dd2f] MacroTools v0.5.4
[eff96d63] Measurements v2.2.0
[e1d29d7a] Missings v0.4.3
[46d2c3a1] MuladdMacro v0.2.2
[d41bc354] NLSolversBase v7.6.1
[77ba4419] NaNMath v0.3.3
[b8a86587] NearestNeighbors v0.4.4
[4536629a] OpenBLAS_jll v0.3.7+5
[efe28fd5] OpenSpecFun_jll v0.5.3+1
[87e2bd06] OptimBase v2.0.0
[bac558e1] OrderedCollections v1.1.0
[1dea7af3] OrdinaryDiffEq v5.29.0
[90014a1f] PDMats v0.9.11
[d96e819e] Parameters v0.12.0
[f27b6e38] Polynomials v0.6.0
[1fd47b50] QuadGK v2.3.1
[3cdcf5f2] RecipesBase v0.7.0
[731186ca] RecursiveArrayTools v2.1.0
[f2c3362d] RecursiveFactorization v0.1.0
[189a3867] Reexport v0.2.0
[ae029012] Requires v1.0.1
[79098fc4] Rmath v0.6.0
[f2b01f46] Roots v0.8.4
[05bca326] SimpleDiffEq v1.1.0
[699a6c99] SimpleTraits v0.9.1
[a2af1166] SortingAlgorithms v0.3.1
[47a9eef4] SparseDiffTools v1.3.3
[276daf66] SpecialFunctions v0.9.0
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.1
[4c63d2b9] StatsFuns v0.9.4
[3783bdb8] TableTraits v1.0.0
[a2a6695c] TreeViews v0.3.0
[19fa3120] VertexSafeGraphs v0.1.1
[700de1a5] ZygoteRules v0.2.0
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[4607b0f0] SuiteSparse
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
Update message: ChaosTools v1.9
A method to calculate the expansion entropy for discrete and
continuous systems is now included as `expansionentropy`!
See B. Hunt & E. Ott, ‘Defining Chaos’, Chaos 25.9 (2015).
Testing lyapunov exponents...
Test Summary: | Pass Total
Lyapunovs | 38 38
Test Summary: | Pass Total
1D Lyapunovs | 1 1
Test Summary: | Pass Total
Negative λ, continuous | 3 3
Test Summary: | Pass Total
Negative λ, discrete | 2 2
Test Summary: | Pass Total
Lyapunov convergence | 1 1
Testing GALI...
Test Summary: | Pass Total
GALI discrete | 30 30
Test Summary: | Pass Total
GALI continuous | 24 24
Testing Partially predictable chaos...
55.751274 seconds (57.72 M allocations: 2.152 GiB, 4.32% gc time)
strongly chaotic: done
19.832259 seconds (16.16 M allocations: 258.920 MiB, 0.36% gc time)
ppc1: done
16.243484 seconds (12.56 M allocations: 192.271 MiB, 0.45% gc time)
ppc2: done
16.223414 seconds (12.76 M allocations: 203.392 MiB, 0.31% gc time)
laminar: done
Test Summary: | Pass Total
Predictability Lorenz | 12 12
Test Summary: | Pass Total
Predictability Discrete | 4 4
Testing poincare sections...
Test Summary: | Pass Total
Poincare SOS | 165 165
Test Summary: | Pass Total
Produce OD | 5 5
Testing orbit diagrams...
Test Summary: | Pass Total
Orbit Diagram | 5 5
Testing finding stable & unstable fixed points...
Test Summary: | Pass Total
Standard Map | 38 38
Testing generalized entropy (genentropy) & linear scaling...
Test Summary: | Pass Total
Generalized Dimensions | 7 7
Testing dimension calls (all names)...
Test Summary: | Pass Total
Dimension calls | 3 3
Testing permutation entropy...
Test Summary: | Pass Total
Permutation Entropy | 7 7
Testing nonlinear timeseries analysis...
Test Summary: | Pass Total
Henon reconstruct | 13 13
Test Summary: | Pass Total
Multidim Multitime R | 1 1
Test Summary: | Pass Total
Broomhead-King | 33 33
Testing period estimation...
Test Summary: | Pass Total
sin(t) | 5 5
Test Summary: | Pass Total
sin(2t) | 5 5
Test Summary: | Pass Total
Roessler | 5 5
Test Summary: | Pass Total
Modified FitzHugh-Nagumo | 5 5
Testing 0-1 chaos test...
Test Summary: | Pass Total
logistic | 4 4
Test Summary: | Pass Total
Standard Map | 4 4
Test Summary: | Pass Total
henonheiles | 5 5
Testing expansion entropy...
Test Summary: | Pass Total
Expansion entropy | 106 106
Test took total time of:
907.5849549770355 seconds or 15.126 minutes
Testing ChaosTools tests passed