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1.5.0-DEV-7206b56e94.log
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1.5.0-DEV-7206b56e94.log
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Julia Version 1.5.0-DEV.485
Commit 7206b56e94 (2020-03-18 17:25 UTC)
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-9.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed LinearDynamicsModels ───────── v1.0.1
Installed OpenSpecFun_jll ────────────── v0.5.3+3
Installed DifferentialDynamicsModels ─── v1.0.1
Installed DiffResults ────────────────── v1.0.2
Installed CommonSubexpressions ───────── v0.2.0
Installed SpecialFunctions ───────────── v0.10.0
Installed MacroTools ─────────────────── v0.5.4
Installed DataStructures ─────────────── v0.17.10
Installed DiffRules ──────────────────── v1.0.1
Installed NaNMath ────────────────────── v0.3.3
Installed ForwardDiff ────────────────── v0.10.9
Installed OrderedCollections ─────────── v1.1.0
Installed CompilerSupportLibraries_jll ─ v0.3.0+0
Installed Requires ───────────────────── v1.0.1
Installed StaticArrays ───────────────── v0.12.1
#=#=# ######################################################################## 100.0%
#=#=# ## 3.0%###### 8.5%############ 16.7%################## 25.9%############################ 39.4%####################################### 54.6%##################################################### 74.7%######################################################################## 100.0%
Updating `~/.julia/environments/v1.5/Project.toml`
93c30095 + LinearDynamicsModels v1.0.1
Updating `~/.julia/environments/v1.5/Manifest.toml`
bbf7d656 + CommonSubexpressions v0.2.0
e66e0078 + CompilerSupportLibraries_jll v0.3.0+0
864edb3b + DataStructures v0.17.10
163ba53b + DiffResults v1.0.2
b552c78f + DiffRules v1.0.1
cb52cc87 + DifferentialDynamicsModels v1.0.1
f6369f11 + ForwardDiff v0.10.9
93c30095 + LinearDynamicsModels v1.0.1
1914dd2f + MacroTools v0.5.4
77ba4419 + NaNMath v0.3.3
efe28fd5 + OpenSpecFun_jll v0.5.3+3
bac558e1 + OrderedCollections v1.1.0
ae029012 + Requires v1.0.1
276daf66 + SpecialFunctions v0.10.0
90137ffa + StaticArrays v0.12.1
2a0f44e3 + Base64
ade2ca70 + Dates
8ba89e20 + Distributed
b77e0a4c + InteractiveUtils
76f85450 + LibGit2
8f399da3 + Libdl
37e2e46d + LinearAlgebra
56ddb016 + Logging
d6f4376e + Markdown
44cfe95a + Pkg
de0858da + Printf
3fa0cd96 + REPL
9a3f8284 + Random
ea8e919c + SHA
9e88b42a + Serialization
6462fe0b + Sockets
2f01184e + SparseArrays
10745b16 + Statistics
8dfed614 + Test
cf7118a7 + UUIDs
4ec0a83e + Unicode
Testing LinearDynamicsModels
Status `/tmp/jl_JwYbEz/Project.toml`
cb52cc87 DifferentialDynamicsModels v1.0.1
f6369f11 ForwardDiff v0.10.9
93c30095 LinearDynamicsModels v1.0.1
1914dd2f MacroTools v0.5.4
ae029012 Requires v1.0.1
90137ffa StaticArrays v0.12.1
24249f21 SymPy v1.0.18
37e2e46d LinearAlgebra
8dfed614 Test
Status `/tmp/jl_JwYbEz/Manifest.toml`
bbf7d656 CommonSubexpressions v0.2.0
e66e0078 CompilerSupportLibraries_jll v0.3.0+0
8f4d0f93 Conda v1.4.1
864edb3b DataStructures v0.17.10
163ba53b DiffResults v1.0.2
b552c78f DiffRules v1.0.1
cb52cc87 DifferentialDynamicsModels v1.0.1
f6369f11 ForwardDiff v0.10.9
682c06a0 JSON v0.21.0
93c30095 LinearDynamicsModels v1.0.1
1914dd2f MacroTools v0.5.4
77ba4419 NaNMath v0.3.3
efe28fd5 OpenSpecFun_jll v0.5.3+3
bac558e1 OrderedCollections v1.1.0
69de0a69 Parsers v0.3.12
438e738f PyCall v1.91.4
3cdcf5f2 RecipesBase v0.7.0
ae029012 Requires v1.0.1
276daf66 SpecialFunctions v0.10.0
90137ffa StaticArrays v0.12.1
24249f21 SymPy v1.0.18
81def892 VersionParsing v1.2.0
2a0f44e3 Base64
ade2ca70 Dates
8ba89e20 Distributed
b77e0a4c InteractiveUtils
76f85450 LibGit2
8f399da3 Libdl
37e2e46d LinearAlgebra
56ddb016 Logging
d6f4376e Markdown
a63ad114 Mmap
44cfe95a Pkg
de0858da Printf
3fa0cd96 REPL
9a3f8284 Random
ea8e919c SHA
9e88b42a Serialization
6462fe0b Sockets
2f01184e SparseArrays
10745b16 Statistics
8dfed614 Test
cf7118a7 UUIDs
4ec0a83e Unicode
ERROR: LoadError: InitError: PyError (PyImport_ImportModule
The Python package sympy could not be found by pyimport. Usually this means
that you did not install sympy in the Python version being used by PyCall.
PyCall is currently configured to use the Python version at:
/usr/bin/python3
and you should use whatever mechanism you usually use (apt-get, pip, conda,
etcetera) to install the Python package containing the sympy module.
One alternative is to re-configure PyCall to use a different Python
version on your system: set ENV["PYTHON"] to the path/name of the python
executable you want to use, run Pkg.build("PyCall"), and re-launch Julia.
Another alternative is to configure PyCall to use a Julia-specific Python
distribution via the Conda.jl package (which installs a private Anaconda
Python distribution), which has the advantage that packages can be installed
and kept up-to-date via Julia. As explained in the PyCall documentation,
set ENV["PYTHON"]="", run Pkg.build("PyCall"), and re-launch Julia. Then,
To install the sympy module, you can use `pyimport_conda("sympy", PKG)`,
where PKG is the Anaconda package the contains the module sympy,
or alternatively you can use the Conda package directly (via
`using Conda` followed by `Conda.add` etcetera).
) <class 'ModuleNotFoundError'>
ModuleNotFoundError("No module named 'sympy'",)
Stacktrace:
[1] pyimport(::String) at /home/pkgeval/.julia/packages/PyCall/zqDXB/src/PyCall.jl:536
[2] pyimport_conda(::String, ::String, ::String) at /home/pkgeval/.julia/packages/PyCall/zqDXB/src/PyCall.jl:694
[3] pyimport_conda at /home/pkgeval/.julia/packages/PyCall/zqDXB/src/PyCall.jl:693 [inlined]
[4] __init__() at /home/pkgeval/.julia/packages/SymPy/U2v57/src/SymPy.jl:99
[5] _include_from_serialized(::String, ::Array{Any,1}) at ./loading.jl:697
[6] _require_from_serialized(::String) at ./loading.jl:748
[7] _require(::Base.PkgId) at ./loading.jl:1039
[8] require(::Base.PkgId) at ./loading.jl:927
[9] require(::Module, ::Symbol) at ./loading.jl:922
[10] include(::String) at ./client.jl:441
[11] top-level scope at none:6
during initialization of module SymPy
in expression starting at /home/pkgeval/.julia/packages/LinearDynamicsModels/zCSBW/test/runtests.jl:24
ERROR: Package LinearDynamicsModels errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/Types.jl:53
[2] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/Operations.jl:1523
[3] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:316
[4] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:303
[5] #test#68 at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:297 [inlined]
[6] test at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:297 [inlined]
[7] #test#67 at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:296 [inlined]
[8] test at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:296 [inlined]
[9] test(::String; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:295
[10] test(::String) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:295
[11] top-level scope at none:13