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1.5.0-DEV-7206b56e94.log
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1.5.0-DEV-7206b56e94.log
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Julia Version 1.5.0-DEV.485
Commit 7206b56e94 (2020-03-18 17:25 UTC)
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-9.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed CodecZlib ──────────────────── v0.6.0
Installed Distances ──────────────────── v0.8.2
Installed Parameters ─────────────────── v0.12.0
Installed QuadGK ─────────────────────── v2.3.1
Installed LineSearches ───────────────── v7.0.1
Installed StaticArrays ───────────────── v0.12.1
Installed GridapPETSc ────────────────── v0.2.0
Installed DocStringExtensions ────────── v0.8.1
Installed JLD2 ───────────────────────── v0.1.12
Installed DiffResults ────────────────── v1.0.2
Installed Combinatorics ──────────────── v1.0.0
Installed NaNMath ────────────────────── v0.3.3
Installed JSON ───────────────────────── v0.21.0
Installed CommonSubexpressions ───────── v0.2.0
Installed Reexport ───────────────────── v0.2.0
Installed CompilerSupportLibraries_jll ─ v0.3.0+0
Installed LightXML ───────────────────── v0.8.1
Installed DataStructures ─────────────── v0.17.10
Installed RecipesBase ────────────────── v0.8.0
Installed Parsers ────────────────────── v0.3.12
Installed SpecialFunctions ───────────── v0.10.0
Installed OpenSpecFun_jll ────────────── v0.5.3+3
Installed BSON ───────────────────────── v0.2.5
Installed NLsolve ────────────────────── v4.3.0
Installed FileIO ─────────────────────── v1.2.3
Installed BinaryProvider ─────────────── v0.5.8
Installed Polynomials ────────────────── v0.6.1
Installed MPI ────────────────────────── v0.10.1
Installed WriteVTK ───────────────────── v1.4.0
Installed Requires ───────────────────── v1.0.1
Installed ArrayInterface ─────────────── v2.5.1
Installed FiniteDiff ─────────────────── v2.2.1
Installed FastGaussQuadrature ────────── v0.4.2
Installed OrderedCollections ─────────── v1.1.0
Installed DiffRules ──────────────────── v1.0.1
Installed FillArrays ─────────────────── v0.8.5
Installed TranscodingStreams ─────────── v0.9.5
Installed NLSolversBase ──────────────── v7.6.1
Installed ForwardDiff ────────────────── v0.10.9
Installed Gridap ─────────────────────── v0.7.1
#=#=# ## 3.6%####### 10.4%############## 20.6%######################## 33.7%#################################### 50.9%####################################################### 77.1%######################################################################## 100.0%
##### 7.0%######################################################################## 100.0%
Updating `~/.julia/environments/v1.5/Project.toml`
bcdc36c2 + GridapPETSc v0.2.0
Updating `~/.julia/environments/v1.5/Manifest.toml`
4fba245c + ArrayInterface v2.5.1
fbb218c0 + BSON v0.2.5
b99e7846 + BinaryProvider v0.5.8
944b1d66 + CodecZlib v0.6.0
861a8166 + Combinatorics v1.0.0
bbf7d656 + CommonSubexpressions v0.2.0
e66e0078 + CompilerSupportLibraries_jll v0.3.0+0
864edb3b + DataStructures v0.17.10
163ba53b + DiffResults v1.0.2
b552c78f + DiffRules v1.0.1
b4f34e82 + Distances v0.8.2
ffbed154 + DocStringExtensions v0.8.1
442a2c76 + FastGaussQuadrature v0.4.2
5789e2e9 + FileIO v1.2.3
1a297f60 + FillArrays v0.8.5
6a86dc24 + FiniteDiff v2.2.1
f6369f11 + ForwardDiff v0.10.9
56d4f2e9 + Gridap v0.7.1
bcdc36c2 + GridapPETSc v0.2.0
033835bb + JLD2 v0.1.12
682c06a0 + JSON v0.21.0
9c8b4983 + LightXML v0.8.1
d3d80556 + LineSearches v7.0.1
da04e1cc + MPI v0.10.1
d41bc354 + NLSolversBase v7.6.1
2774e3e8 + NLsolve v4.3.0
77ba4419 + NaNMath v0.3.3
efe28fd5 + OpenSpecFun_jll v0.5.3+3
bac558e1 + OrderedCollections v1.1.0
d96e819e + Parameters v0.12.0
69de0a69 + Parsers v0.3.12
f27b6e38 + Polynomials v0.6.1
1fd47b50 + QuadGK v2.3.1
3cdcf5f2 + RecipesBase v0.8.0
189a3867 + Reexport v0.2.0
ae029012 + Requires v1.0.1
276daf66 + SpecialFunctions v0.10.0
90137ffa + StaticArrays v0.12.1
3bb67fe8 + TranscodingStreams v0.9.5
64499a7a + WriteVTK v1.4.0
2a0f44e3 + Base64
ade2ca70 + Dates
8ba89e20 + Distributed
b77e0a4c + InteractiveUtils
76f85450 + LibGit2
8f399da3 + Libdl
37e2e46d + LinearAlgebra
56ddb016 + Logging
d6f4376e + Markdown
a63ad114 + Mmap
44cfe95a + Pkg
de0858da + Printf
3fa0cd96 + REPL
9a3f8284 + Random
ea8e919c + SHA
9e88b42a + Serialization
6462fe0b + Sockets
2f01184e + SparseArrays
10745b16 + Statistics
8dfed614 + Test
cf7118a7 + UUIDs
4ec0a83e + Unicode
Building MPI ────────→ `~/.julia/packages/MPI/9zBr2/deps/build.log`
┌ Error: Error building `MPI`:
│ [ Info: Using MPI library
│ ERROR: LoadError: could not load symbol "MPI_Get_version":
│ /opt/julia/bin/julia: undefined symbol: MPI_Get_version
│ Stacktrace:
│ [1] Get_version() at /home/pkgeval/.julia/packages/MPI/9zBr2/deps/build.jl:65
│ [2] top-level scope at /home/pkgeval/.julia/packages/MPI/9zBr2/deps/build.jl:71
│ [3] include(::String) at ./client.jl:441
│ [4] top-level scope at none:5
│ in expression starting at /home/pkgeval/.julia/packages/MPI/9zBr2/deps/build.jl:71
└ @ Pkg.Operations /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/Operations.jl:912
Building CodecZlib ──→ `~/.julia/packages/CodecZlib/5t9zO/deps/build.log`
Building LightXML ───→ `~/.julia/packages/LightXML/W8FVT/deps/build.log`
Building GridapPETSc → `~/.julia/packages/GridapPETSc/NnjX9/deps/build.log`
Testing GridapPETSc
Status `/tmp/jl_pYon4j/Project.toml`
56d4f2e9 Gridap v0.7.1
bcdc36c2 GridapPETSc v0.2.0
da04e1cc MPI v0.10.1
8f399da3 Libdl
2f01184e SparseArrays
8dfed614 Test
Status `/tmp/jl_pYon4j/Manifest.toml`
4fba245c ArrayInterface v2.5.1
fbb218c0 BSON v0.2.5
b99e7846 BinaryProvider v0.5.8
944b1d66 CodecZlib v0.6.0
861a8166 Combinatorics v1.0.0
bbf7d656 CommonSubexpressions v0.2.0
e66e0078 CompilerSupportLibraries_jll v0.3.0+0
864edb3b DataStructures v0.17.10
163ba53b DiffResults v1.0.2
b552c78f DiffRules v1.0.1
b4f34e82 Distances v0.8.2
ffbed154 DocStringExtensions v0.8.1
442a2c76 FastGaussQuadrature v0.4.2
5789e2e9 FileIO v1.2.3
1a297f60 FillArrays v0.8.5
6a86dc24 FiniteDiff v2.2.1
f6369f11 ForwardDiff v0.10.9
56d4f2e9 Gridap v0.7.1
bcdc36c2 GridapPETSc v0.2.0
033835bb JLD2 v0.1.12
682c06a0 JSON v0.21.0
9c8b4983 LightXML v0.8.1
d3d80556 LineSearches v7.0.1
da04e1cc MPI v0.10.1
d41bc354 NLSolversBase v7.6.1
2774e3e8 NLsolve v4.3.0
77ba4419 NaNMath v0.3.3
efe28fd5 OpenSpecFun_jll v0.5.3+3
bac558e1 OrderedCollections v1.1.0
d96e819e Parameters v0.12.0
69de0a69 Parsers v0.3.12
f27b6e38 Polynomials v0.6.1
1fd47b50 QuadGK v2.3.1
3cdcf5f2 RecipesBase v0.8.0
189a3867 Reexport v0.2.0
ae029012 Requires v1.0.1
276daf66 SpecialFunctions v0.10.0
90137ffa StaticArrays v0.12.1
3bb67fe8 TranscodingStreams v0.9.5
64499a7a WriteVTK v1.4.0
2a0f44e3 Base64
ade2ca70 Dates
8ba89e20 Distributed
b77e0a4c InteractiveUtils
76f85450 LibGit2
8f399da3 Libdl
37e2e46d LinearAlgebra
56ddb016 Logging
d6f4376e Markdown
a63ad114 Mmap
44cfe95a Pkg
de0858da Printf
3fa0cd96 REPL
9a3f8284 Random
ea8e919c SHA
9e88b42a Serialization
6462fe0b Sockets
2f01184e SparseArrays
10745b16 Statistics
8dfed614 Test
cf7118a7 UUIDs
4ec0a83e Unicode
ERROR: LoadError: could not open file /home/pkgeval/.julia/packages/MPI/9zBr2/deps/deps.jl
Stacktrace:
[1] include(::Function, ::Module, ::String) at ./Base.jl:380
[2] include at ./Base.jl:368 [inlined]
[3] include(::String) at /home/pkgeval/.julia/packages/MPI/9zBr2/src/MPI.jl:1
[4] top-level scope at /home/pkgeval/.julia/packages/MPI/9zBr2/src/MPI.jl:40
[5] include(::Function, ::Module, ::String) at ./Base.jl:380
[6] include(::Module, ::String) at ./Base.jl:368
[7] top-level scope at none:2
[8] eval at ./boot.jl:331 [inlined]
[9] eval(::Expr) at ./client.jl:451
[10] top-level scope at ./none:3
in expression starting at /home/pkgeval/.julia/packages/MPI/9zBr2/src/MPI.jl:40
ERROR: LoadError: Failed to precompile MPI [da04e1cc-30fd-572f-bb4f-1f8673147195] to /home/pkgeval/.julia/compiled/v1.5/MPI/nO0XF_1uUQl.ji.
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1288
[3] _require(::Base.PkgId) at ./loading.jl:1029
[4] require(::Base.PkgId) at ./loading.jl:927
[5] require(::Module, ::Symbol) at ./loading.jl:922
[6] include(::Function, ::Module, ::String) at ./Base.jl:380
[7] include(::Module, ::String) at ./Base.jl:368
[8] top-level scope at none:2
[9] eval at ./boot.jl:331 [inlined]
[10] eval(::Expr) at ./client.jl:451
[11] top-level scope at ./none:3
in expression starting at /home/pkgeval/.julia/packages/GridapPETSc/NnjX9/src/GridapPETSc.jl:4
ERROR: LoadError: Failed to precompile GridapPETSc [bcdc36c2-0c3e-11ea-095a-c9dadae499f1] to /home/pkgeval/.julia/compiled/v1.5/GridapPETSc/jWJ0L_1uUQl.ji.
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1288
[3] _require(::Base.PkgId) at ./loading.jl:1029
[4] require(::Base.PkgId) at ./loading.jl:927
[5] require(::Module, ::Symbol) at ./loading.jl:922
[6] include(::String) at ./client.jl:441
[7] top-level scope at none:6
in expression starting at /home/pkgeval/.julia/packages/GridapPETSc/NnjX9/test/runtests.jl:1
ERROR: Package GridapPETSc errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/Types.jl:53
[2] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/Operations.jl:1523
[3] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:316
[4] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:303
[5] #test#68 at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:297 [inlined]
[6] test at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:297 [inlined]
[7] #test#67 at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:296 [inlined]
[8] test at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:296 [inlined]
[9] test(::String; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:295
[10] test(::String) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:295
[11] top-level scope at none:13