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1.5.0-DEV-7206b56e94.log
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1.5.0-DEV-7206b56e94.log
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Julia Version 1.5.0-DEV.485
Commit 7206b56e94 (2020-03-18 17:25 UTC)
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-9.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed SortingAlgorithms ──────────── v0.3.1
Installed PDMats ─────────────────────── v0.9.12
Installed DataValueInterfaces ────────── v1.0.0
Installed FFTW ───────────────────────── v1.2.0
Installed GEMPIC ─────────────────────── v0.1.0
Installed CategoricalArrays ──────────── v0.7.7
Installed DataFrames ─────────────────── v0.20.2
Installed Distributions ──────────────── v0.23.0
Installed Arpack_jll ─────────────────── v3.5.0+2
Installed Rmath_jll ──────────────────── v0.2.2+0
Installed QuadGK ─────────────────────── v2.3.1
Installed StatsFuns ──────────────────── v0.9.4
Installed JSON ───────────────────────── v0.21.0
Installed DataStructures ─────────────── v0.17.10
Installed StatsBase ──────────────────── v0.32.2
Installed OpenBLAS_jll ───────────────── v0.3.7+7
Installed CompilerSupportLibraries_jll ─ v0.3.0+0
Installed StaticArrays ───────────────── v0.12.1
Installed Reexport ───────────────────── v0.2.0
Installed PooledArrays ───────────────── v0.5.3
Installed Rmath ──────────────────────── v0.6.1
Installed SpecialFunctions ───────────── v0.10.0
Installed OpenSpecFun_jll ────────────── v0.5.3+3
Installed DataAPI ────────────────────── v1.1.0
Installed Missings ───────────────────── v0.4.3
Installed InvertedIndices ────────────── v1.0.0
Installed Parsers ────────────────────── v0.3.12
Installed FFTW_jll ───────────────────── v3.3.9+4
Installed AbstractFFTs ───────────────── v0.5.0
Installed IntelOpenMP_jll ────────────── v2018.0.3+0
Installed MKL_jll ────────────────────── v2019.0.117+2
Installed Sobol ──────────────────────── v1.3.0
Installed IteratorInterfaceExtensions ── v1.0.0
Installed FastGaussQuadrature ────────── v0.4.2
Installed Arpack ─────────────────────── v0.4.0
Installed Compat ─────────────────────── v3.8.0
Installed Tables ─────────────────────── v1.0.3
Installed TableTraits ────────────────── v1.0.0
Installed OrderedCollections ─────────── v1.1.0
Installed FillArrays ─────────────────── v0.8.5
#=#=# ######################################################################## 100.0%
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#=#=# # 2.6%###### 8.4%########### 16.1%################## 25.5%########################## 37.4%################################## 47.7%############################################### 66.1%################################################################ 89.2%######################################################################## 100.0%
#=#=# ##O#- # 0.7%#### 5.8%######## 12.3%############## 19.8%###################### 30.7%############################### 43.3%############################################# 62.9%############################################################## 86.9%######################################################################## 100.0%
#=#=# ######################################################################## 100.0%
#=#=# 0.7%################# 24.0%############################################################### 88.1%######################################################################## 100.0%
#=#=# ######################################################################## 100.0%
Updating `~/.julia/environments/v1.5/Project.toml`
b6d65c3a + GEMPIC v0.1.0
Updating `~/.julia/environments/v1.5/Manifest.toml`
621f4979 + AbstractFFTs v0.5.0
7d9fca2a + Arpack v0.4.0
68821587 + Arpack_jll v3.5.0+2
324d7699 + CategoricalArrays v0.7.7
34da2185 + Compat v3.8.0
e66e0078 + CompilerSupportLibraries_jll v0.3.0+0
9a962f9c + DataAPI v1.1.0
a93c6f00 + DataFrames v0.20.2
864edb3b + DataStructures v0.17.10
e2d170a0 + DataValueInterfaces v1.0.0
31c24e10 + Distributions v0.23.0
7a1cc6ca + FFTW v1.2.0
f5851436 + FFTW_jll v3.3.9+4
442a2c76 + FastGaussQuadrature v0.4.2
1a297f60 + FillArrays v0.8.5
b6d65c3a + GEMPIC v0.1.0
1d5cc7b8 + IntelOpenMP_jll v2018.0.3+0
41ab1584 + InvertedIndices v1.0.0
82899510 + IteratorInterfaceExtensions v1.0.0
682c06a0 + JSON v0.21.0
856f044c + MKL_jll v2019.0.117+2
e1d29d7a + Missings v0.4.3
4536629a + OpenBLAS_jll v0.3.7+7
efe28fd5 + OpenSpecFun_jll v0.5.3+3
bac558e1 + OrderedCollections v1.1.0
90014a1f + PDMats v0.9.12
69de0a69 + Parsers v0.3.12
2dfb63ee + PooledArrays v0.5.3
1fd47b50 + QuadGK v2.3.1
189a3867 + Reexport v0.2.0
79098fc4 + Rmath v0.6.1
f50d1b31 + Rmath_jll v0.2.2+0
ed01d8cd + Sobol v1.3.0
a2af1166 + SortingAlgorithms v0.3.1
276daf66 + SpecialFunctions v0.10.0
90137ffa + StaticArrays v0.12.1
2913bbd2 + StatsBase v0.32.2
4c63d2b9 + StatsFuns v0.9.4
3783bdb8 + TableTraits v1.0.0
bd369af6 + Tables v1.0.3
2a0f44e3 + Base64
ade2ca70 + Dates
8bb1440f + DelimitedFiles
8ba89e20 + Distributed
9fa8497b + Future
b77e0a4c + InteractiveUtils
76f85450 + LibGit2
8f399da3 + Libdl
37e2e46d + LinearAlgebra
56ddb016 + Logging
d6f4376e + Markdown
a63ad114 + Mmap
44cfe95a + Pkg
de0858da + Printf
3fa0cd96 + REPL
9a3f8284 + Random
ea8e919c + SHA
9e88b42a + Serialization
1a1011a3 + SharedArrays
6462fe0b + Sockets
2f01184e + SparseArrays
10745b16 + Statistics
4607b0f0 + SuiteSparse
8dfed614 + Test
cf7118a7 + UUIDs
4ec0a83e + Unicode
Building FFTW → `~/.julia/packages/FFTW/qqcBj/deps/build.log`
Testing GEMPIC
Status `/tmp/jl_MyYmqZ/Project.toml`
a93c6f00 DataFrames v0.20.2
31c24e10 Distributions v0.23.0
7a1cc6ca FFTW v1.2.0
442a2c76 FastGaussQuadrature v0.4.2
b6d65c3a GEMPIC v0.1.0
ed01d8cd Sobol v1.3.0
90137ffa StaticArrays v0.12.1
37e2e46d LinearAlgebra
44cfe95a Pkg
9a3f8284 Random
8dfed614 Test
Status `/tmp/jl_MyYmqZ/Manifest.toml`
621f4979 AbstractFFTs v0.5.0
7d9fca2a Arpack v0.4.0
68821587 Arpack_jll v3.5.0+2
324d7699 CategoricalArrays v0.7.7
34da2185 Compat v3.8.0
e66e0078 CompilerSupportLibraries_jll v0.3.0+0
9a962f9c DataAPI v1.1.0
a93c6f00 DataFrames v0.20.2
864edb3b DataStructures v0.17.10
e2d170a0 DataValueInterfaces v1.0.0
31c24e10 Distributions v0.23.0
7a1cc6ca FFTW v1.2.0
f5851436 FFTW_jll v3.3.9+4
442a2c76 FastGaussQuadrature v0.4.2
1a297f60 FillArrays v0.8.5
b6d65c3a GEMPIC v0.1.0
1d5cc7b8 IntelOpenMP_jll v2018.0.3+0
41ab1584 InvertedIndices v1.0.0
82899510 IteratorInterfaceExtensions v1.0.0
682c06a0 JSON v0.21.0
856f044c MKL_jll v2019.0.117+2
e1d29d7a Missings v0.4.3
4536629a OpenBLAS_jll v0.3.7+7
efe28fd5 OpenSpecFun_jll v0.5.3+3
bac558e1 OrderedCollections v1.1.0
90014a1f PDMats v0.9.12
69de0a69 Parsers v0.3.12
2dfb63ee PooledArrays v0.5.3
1fd47b50 QuadGK v2.3.1
189a3867 Reexport v0.2.0
79098fc4 Rmath v0.6.1
f50d1b31 Rmath_jll v0.2.2+0
ed01d8cd Sobol v1.3.0
a2af1166 SortingAlgorithms v0.3.1
276daf66 SpecialFunctions v0.10.0
90137ffa StaticArrays v0.12.1
2913bbd2 StatsBase v0.32.2
4c63d2b9 StatsFuns v0.9.4
3783bdb8 TableTraits v1.0.0
bd369af6 Tables v1.0.3
2a0f44e3 Base64
ade2ca70 Dates
8bb1440f DelimitedFiles
8ba89e20 Distributed
9fa8497b Future
b77e0a4c InteractiveUtils
76f85450 LibGit2
8f399da3 Libdl
37e2e46d LinearAlgebra
56ddb016 Logging
d6f4376e Markdown
a63ad114 Mmap
44cfe95a Pkg
de0858da Printf
3fa0cd96 REPL
9a3f8284 Random
ea8e919c SHA
9e88b42a Serialization
1a1011a3 SharedArrays
6462fe0b Sockets
2f01184e SparseArrays
10745b16 Statistics
4607b0f0 SuiteSparse
8dfed614 Test
cf7118a7 UUIDs
4ec0a83e Unicode
thdiag.data = 6×11 DataFrames.DataFrame
│ Row │ Time │ KineticEnergy │ Momentum1 │ Momentum2 │ PotentialEnergyE1 │ PotentialEnergyE2 │ PotentialEnergyB3 │ Transfer │ VVB │ Poynting │ ErrorPoisson │
│ │ Float64 │ Float64 │ Float64 │ Float64 │ Float64 │ Float64 │ Float64 │ Float64 │ Float64 │ Float64 │ Float64 │
├─────┼─────────┼───────────────┼─────────────┼──────────────┼───────────────────┼───────────────────┼───────────────────┼─────────────┼──────────────┼────────────┼──────────────┤
│ 1 │ 0.0 │ 0.200628 │ 0.0 │ 0.0 │ 2.48154e-7 │ 0.0 │ 2.46528e-8 │ 0.0 │ 0.0 │ 0.0 │ 0.00044278 │
│ 2 │ 0.05 │ 0.200628 │ -1.53105e-8 │ -1.66323e-11 │ 2.48121e-7 │ 9.59966e-11 │ 2.45566e-8 │ -2.06207e-8 │ -4.92298e-11 │ 1.2268e-5 │ 0.000134855 │
│ 3 │ 0.1 │ 0.200628 │ -2.86874e-8 │ -6.61634e-11 │ 2.59965e-7 │ 3.8157e-10 │ 2.42699e-8 │ -2.66256e-7 │ -9.78505e-11 │ 2.4459e-5 │ 0.000516444 │
│ 4 │ 0.15 │ 0.200627 │ -3.84083e-8 │ -1.47518e-10 │ 3.11424e-7 │ 8.49533e-10 │ 2.37978e-8 │ -8.04733e-7 │ -1.45261e-10 │ 3.64967e-5 │ 0.00108332 │
│ 5 │ 0.2 │ 0.200627 │ -4.28354e-8 │ -2.58946e-10 │ 4.25949e-7 │ 1.48811e-9 │ 2.31487e-8 │ -1.48847e-6 │ -1.90874e-10 │ 4.83061e-5 │ 0.0017276 │
│ 6 │ 0.25 │ 0.200627 │ -4.03479e-8 │ -3.98025e-10 │ 6.04993e-7 │ 2.28123e-9 │ 2.23341e-8 │ -2.04818e-6 │ -2.34126e-10 │ 5.98137e-5 │ 0.00235988 │
Test Summary: | Pass Total
PIC VM 1D2V | 5 5
Test Summary: | Pass Total
Mesh | 6 6
Test Summary: | Pass Total
spline pp 1d | 15 15
error Poisson 1.2098449631015029e-8
Test Summary: | Pass Total
Maxwell 1D FEM solver | 22 22
[ Info: Sobol non symmetric
abs.(mean .- mean_ref) = [7.647948840272534e-5, 1.9882897803661297e-5, 0.006349136307456062]
abs.(sigma .- sigma_ref) = [3.657929851463848e-5, 2.3879503505174274e-5, 0.017761580874363858]
[ Info: Sobol symmetric
abs.(mean .- mean_ref) = [0.0, 0.0, 0.0]
abs.(sigma .- sigma_ref) = [0.0033103106985361563, 0.0002214055014026755, 0.013203195849894378]
[ Info: Random non symmetric
abs.(mean .- mean_ref) = [0.0013691850584667264, 0.0003209359049886345, 0.0014692828246817959]
abs.(sigma .- sigma_ref) = [0.03268925874195716, 4.3017522186172136e-6, 0.00012374777487123012]
[ Info: Random symmetric
abs.(mean .- mean_ref) = [5.062616992290714e-14, 0.0, 0.0]
abs.(sigma .- sigma_ref) = [0.09673073608386673, 4.8657014090012704e-5, 0.004127660944684308]
[ Info: Sobol non symmetric
abs.(mean .- mean_ref) = [7.647948840272534e-5, 0.3002165525087552, 0.2921731964608957]
abs.(sigma .- sigma_ref) = [3.657929851463848e-5, 1.1969915661966237, 0.9347270611575409]
[ Info: Sobol symmetric
abs.(mean .- mean_ref) = [0.0, 8.00000000000245e-5, 7.999999999996898e-5]
abs.(sigma .- sigma_ref) = [0.0033103106985361563, 0.18571272557865082, 0.7892297148418832]
Test Summary: | Pass Total
Sampling | 6 6
Test Summary: | Pass Total
particle-mesh coupling with spline 1d | 6 6
Test Summary: | Pass Total
Hamiltonian splitting | 35 35
Test Summary: | Pass Total
Hamiltonian splitting Boris | 11 11
Testing GEMPIC tests passed