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1.5.0-DEV-7206b56e94.log
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Julia Version 1.5.0-DEV.485
Commit 7206b56e94 (2020-03-18 17:25 UTC)
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-9.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed PDMats ─────────────────────── v0.9.12
Installed SortingAlgorithms ──────────── v0.3.1
Installed DataValueInterfaces ────────── v1.0.0
Installed Roots ──────────────────────── v0.8.4
Installed ClinicalTrialUtilities ─────── v0.2.3
Installed CategoricalArrays ──────────── v0.7.7
Installed DataFrames ─────────────────── v0.20.2
Installed Distributions ──────────────── v0.22.6
Installed Arpack_jll ─────────────────── v3.5.0+2
Installed Rmath_jll ──────────────────── v0.2.2+0
Installed WeakRefStrings ─────────────── v0.6.2
Installed QuadGK ─────────────────────── v2.3.1
Installed StatsFuns ──────────────────── v0.9.4
Installed OpenBLAS_jll ───────────────── v0.3.7+7
Installed CompilerSupportLibraries_jll ─ v0.3.0+0
Installed Reexport ───────────────────── v0.2.0
Installed JSON ───────────────────────── v0.21.0
Installed DataStructures ─────────────── v0.17.10
Installed StatsBase ──────────────────── v0.32.2
Installed Rmath ──────────────────────── v0.6.1
Installed InvertedIndices ────────────── v1.0.0
Installed PooledArrays ───────────────── v0.5.3
Installed Parsers ────────────────────── v0.3.12
Installed OpenSpecFun_jll ────────────── v0.5.3+3
Installed SpecialFunctions ───────────── v0.9.0
Installed RecipesBase ────────────────── v0.7.0
Installed DataAPI ────────────────────── v1.1.0
Installed Missings ───────────────────── v0.4.3
Installed IteratorInterfaceExtensions ── v1.0.0
Installed Tables ─────────────────────── v1.0.3
Installed FilePathsBase ──────────────── v0.7.0
Installed TableTraits ────────────────── v1.0.0
Installed Arpack ─────────────────────── v0.4.0
Installed OrderedCollections ─────────── v1.1.0
Installed FillArrays ─────────────────── v0.8.5
Installed Compat ─────────────────────── v3.8.0
Installed CSV ────────────────────────── v0.5.26
######### 13.7%######################################################################## 100.0%
#=#=# ######################################################################## 100.0%
#=#=# ###### 8.6%################### 26.5%################################## 47.5%########################################### 60.7%################################################## 70.6%########################################################## 81.7%###################################################################### 97.3%######################################################################## 100.0%
0.1%############ 17.0%#################################### 51.0%##################################################################### 96.1%######################################################################## 100.0%
#=#=# ######################################################################## 100.0%
Updating `~/.julia/environments/v1.5/Project.toml`
535c2557 + ClinicalTrialUtilities v0.2.3
Updating `~/.julia/environments/v1.5/Manifest.toml`
7d9fca2a + Arpack v0.4.0
68821587 + Arpack_jll v3.5.0+2
336ed68f + CSV v0.5.26
324d7699 + CategoricalArrays v0.7.7
535c2557 + ClinicalTrialUtilities v0.2.3
34da2185 + Compat v3.8.0
e66e0078 + CompilerSupportLibraries_jll v0.3.0+0
9a962f9c + DataAPI v1.1.0
a93c6f00 + DataFrames v0.20.2
864edb3b + DataStructures v0.17.10
e2d170a0 + DataValueInterfaces v1.0.0
31c24e10 + Distributions v0.22.6
48062228 + FilePathsBase v0.7.0
1a297f60 + FillArrays v0.8.5
41ab1584 + InvertedIndices v1.0.0
82899510 + IteratorInterfaceExtensions v1.0.0
682c06a0 + JSON v0.21.0
e1d29d7a + Missings v0.4.3
4536629a + OpenBLAS_jll v0.3.7+7
efe28fd5 + OpenSpecFun_jll v0.5.3+3
bac558e1 + OrderedCollections v1.1.0
90014a1f + PDMats v0.9.12
69de0a69 + Parsers v0.3.12
2dfb63ee + PooledArrays v0.5.3
1fd47b50 + QuadGK v2.3.1
3cdcf5f2 + RecipesBase v0.7.0
189a3867 + Reexport v0.2.0
79098fc4 + Rmath v0.6.1
f50d1b31 + Rmath_jll v0.2.2+0
f2b01f46 + Roots v0.8.4
a2af1166 + SortingAlgorithms v0.3.1
276daf66 + SpecialFunctions v0.9.0
2913bbd2 + StatsBase v0.32.2
4c63d2b9 + StatsFuns v0.9.4
3783bdb8 + TableTraits v1.0.0
bd369af6 + Tables v1.0.3
ea10d353 + WeakRefStrings v0.6.2
2a0f44e3 + Base64
ade2ca70 + Dates
8bb1440f + DelimitedFiles
8ba89e20 + Distributed
9fa8497b + Future
b77e0a4c + InteractiveUtils
76f85450 + LibGit2
8f399da3 + Libdl
37e2e46d + LinearAlgebra
56ddb016 + Logging
d6f4376e + Markdown
a63ad114 + Mmap
44cfe95a + Pkg
de0858da + Printf
3fa0cd96 + REPL
9a3f8284 + Random
ea8e919c + SHA
9e88b42a + Serialization
1a1011a3 + SharedArrays
6462fe0b + Sockets
2f01184e + SparseArrays
10745b16 + Statistics
4607b0f0 + SuiteSparse
8dfed614 + Test
cf7118a7 + UUIDs
4ec0a83e + Unicode
Testing ClinicalTrialUtilities
Status `/tmp/jl_7Z9HLu/Project.toml`
336ed68f CSV v0.5.26
535c2557 ClinicalTrialUtilities v0.2.3
a93c6f00 DataFrames v0.20.2
31c24e10 Distributions v0.22.6
91a5bcdd Plots v0.28.4
1fd47b50 QuadGK v2.3.1
3cdcf5f2 RecipesBase v0.7.0
189a3867 Reexport v0.2.0
f2b01f46 Roots v0.8.4
276daf66 SpecialFunctions v0.9.0
2913bbd2 StatsBase v0.32.2
9a3f8284 Random
8dfed614 Test
Status `/tmp/jl_7Z9HLu/Manifest.toml`
7d9fca2a Arpack v0.4.0
68821587 Arpack_jll v3.5.0+2
b99e7846 BinaryProvider v0.5.8
336ed68f CSV v0.5.26
324d7699 CategoricalArrays v0.7.7
535c2557 ClinicalTrialUtilities v0.2.3
3da002f7 ColorTypes v0.10.0
5ae59095 Colors v0.12.0
34da2185 Compat v3.8.0
e66e0078 CompilerSupportLibraries_jll v0.3.0+0
d38c429a Contour v0.5.2
9a962f9c DataAPI v1.1.0
a93c6f00 DataFrames v0.20.2
864edb3b DataStructures v0.17.10
e2d170a0 DataValueInterfaces v1.0.0
31c24e10 Distributions v0.22.6
c87230d0 FFMPEG v0.2.4
48062228 FilePathsBase v0.7.0
1a297f60 FillArrays v0.8.5
53c48c17 FixedPointNumbers v0.6.1
28b8d3ca GR v0.44.0
4d00f742 GeometryTypes v0.7.6
41ab1584 InvertedIndices v1.0.0
c8e1da08 IterTools v1.3.0
82899510 IteratorInterfaceExtensions v1.0.0
682c06a0 JSON v0.21.0
442fdcdd Measures v0.3.1
e1d29d7a Missings v0.4.3
77ba4419 NaNMath v0.3.3
4536629a OpenBLAS_jll v0.3.7+7
efe28fd5 OpenSpecFun_jll v0.5.3+3
bac558e1 OrderedCollections v1.1.0
90014a1f PDMats v0.9.12
69de0a69 Parsers v0.3.12
ccf2f8ad PlotThemes v1.0.1
995b91a9 PlotUtils v0.6.4
91a5bcdd Plots v0.28.4
2dfb63ee PooledArrays v0.5.3
1fd47b50 QuadGK v2.3.1
3cdcf5f2 RecipesBase v0.7.0
189a3867 Reexport v0.2.0
ae029012 Requires v1.0.1
79098fc4 Rmath v0.6.1
f50d1b31 Rmath_jll v0.2.2+0
f2b01f46 Roots v0.8.4
992d4aef Showoff v0.3.1
a2af1166 SortingAlgorithms v0.3.1
276daf66 SpecialFunctions v0.9.0
90137ffa StaticArrays v0.12.1
2913bbd2 StatsBase v0.32.2
4c63d2b9 StatsFuns v0.9.4
3783bdb8 TableTraits v1.0.0
bd369af6 Tables v1.0.3
ea10d353 WeakRefStrings v0.6.2
2a0f44e3 Base64
ade2ca70 Dates
8bb1440f DelimitedFiles
8ba89e20 Distributed
9fa8497b Future
b77e0a4c InteractiveUtils
76f85450 LibGit2
8f399da3 Libdl
37e2e46d LinearAlgebra
56ddb016 Logging
d6f4376e Markdown
a63ad114 Mmap
44cfe95a Pkg
de0858da Printf
3fa0cd96 REPL
9a3f8284 Random
ea8e919c SHA
9e88b42a Serialization
1a1011a3 SharedArrays
6462fe0b Sockets
2f01184e SparseArrays
10745b16 Statistics
4607b0f0 SuiteSparse
8dfed614 Test
cf7118a7 UUIDs
4ec0a83e Unicode
Package name: ClinicalTrialUtilities
Clinical Trial Power and Sample Size Utilities
Copyright © 2019 Vladimir Arnautov aka PharmCat ([email protected])
For references, citations and copyrights run: ClinicalTrialUtilities.citation()
Licence: ClinicalTrialUtilities.licence()
Test Summary: |
Info: | No tests
----------------------------------
--------- START TEST ---------
----------------------------------
----------------------------------
Test Summary: | Pass Total
#1 ctsamplen Test | 21 21
----------------------------------
Test Summary: | Pass Total
#2 ctpower Test | 16 16
----------------------------------
Test Summary: | Pass Total
#3 besamplen Test | 18 18
----------------------------------
Test Summary: | Pass Total
#4 bepower Test | 26 26
----------------------------------
Test Summary: | Pass Total
#5 utils Test | 19 19
----------------------------------
Test Summary: | Pass Total
Internal functions test | 34 34
----------------------------------
Test Summary: | Pass Total
CI Test | 150 150
----------------------------------
Test Summary: | Pass Total
Simulations | 2 2
----------------------------------
Test Summary: | Pass Total
descriptives | 37 37
----------------------------------
Test Summary: | Pass Total
Frequency | 2 2
----------------------------------
┌ Warning: `names!(df::AbstractDataFrame, vals::Vector{Symbol}; makeunique::Bool = false)` is deprecated, use `rename!(df, vals, makeunique = makeunique)` instead.
│ caller = randomtable(; blocksize::Int64, subject::Int64, group::Int64, ratio::Array{Int64,1}, grseq::Array{String,1}, seed::Int64) at randomization.jl:77
└ @ ClinicalTrialUtilities ~/.julia/packages/ClinicalTrialUtilities/pAuo5/src/randomization.jl:77
Test Summary: | Pass Total
Random | 2 2
----------------------------------
Test Summary: | Pass Total
PK | 47 47
----------------------------------
Test Summary: | Pass Total
UPK | 4 4
----------------------------------
Test Summary: | Pass Total
PD | 12 12
----------------------------------
Test Summary: | Pass Total
Scenario | 3 3
----------------------------------
Test Summary: | Pass Total
HTML export | 1 1
----------------------------------
Test Summary: | Pass Total
Errors | 9 9
Testing ClinicalTrialUtilities tests passed