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iio.c
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iio.c
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// IIO: a library for reading small images {{{1
//
// Goal: load an image (of unknown format) from a given file
//
// Technique: read the first few bytes of the file to identify the format, and
// call the appropriate image library (lipng, lipjpeg, libtiff, etc). For
// simple, uncompressed formats, write the loading code by hand. For formats
// having a library with a nice API, call the library functions. For other or
// unrecognized formats use an external program (convert, anytopnm,
// gm convert...) to convert them into a readable format. If anything else
// fails, assume that the image is in headings+raw format, and try to extract
// its dimensions and headings using some heuristics (file name containing
// "%dx%d", headings containing ascii numbers, etc.)
//
// Difficulties: most image libraries expect to be fed a whole file, not a
// beheaded file. Thus, some hackery is necessary.
//
// See file "iio.txt" for slightly more detailed documentation, and "iio.h" for
// the API
//
// #defines {{{1
//
// editable configuration
//
#define IIO_SHOW_DEBUG_MESSAGES
//#define IIO_DISABLE_IMGLIBS
//#define IIO_ABORT_ON_ERROR
#define I_CAN_HAS_LIBPNG
#define I_CAN_HAS_LIBJPEG
#define I_CAN_HAS_LIBTIFF
//#define I_CAN_HAS_LIBWEBP
//#define I_CAN_HAS_LIBHEIF
//#define I_CAN_HAS_LIBAVIF
//#define I_CAN_HAS_LIBHDF5
//#define I_CAN_HAS_LIBEXR
#define I_CAN_HAS_WGET
#define I_CAN_HAS_WHATEVER
//#define I_CAN_KEEP_TMP_FILES
#define I_CAN_HAS_INT64
//
// portability macros to choose OS features
//
//
#define I_CAN_POSIX
#define I_CAN_LINUX
#define I_CAN_GETENV
//
// no need to edit below here
//
#ifdef IIO_SHOW_DEBUG_MESSAGES
# ifdef __STRICT_ANSI__
# define IIO_DEBUG(...) do {\
if (xgetenv("IIO_DEBUG")){\
fprintf(stderr,"DEBUG(%s:%d:%s): ",__FILE__,__LINE__,__func__);\
fprintf(stderr,__VA_ARGS__);}} while(0)
# else//__STRICT_ANSI__
# define IIO_DEBUG(...) do {\
if (xgetenv("IIO_DEBUG")) {\
switch(atoi(xgetenv("IIO_DEBUG"))) {\
case 3: fprintf(stderr,"DEBUG(%s:%d:%s): ",__FILE__,__LINE__,__PRETTY_FUNCTION__); break;\
case 2: fprintf(stderr,"DEBUG(%s:%d): ",__FILE__,__LINE__); break;\
case 1: fprintf(stderr,"DEBUG: "); break;\
default: break; } fprintf(stderr,__VA_ARGS__); } } while(0)
# endif//__STRICT_ANSI__
#else//IIO_SHOW_DEBUG_MESSAGES
# define IIO_DEBUG(...) do { do_nop(__VA_ARGS__); } while(0) /* nothing */
#endif//IIO_SHOW_DEBUG_MESSAGES
#ifdef IIO_DISABLE_LIBEXR
#undef I_CAN_HAS_LIBEXR
#endif
#ifdef IIO_DISABLE_LIBPNG
#undef I_CAN_HAS_LIBPNG
#endif
#ifdef IIO_DISABLE_LIBJPEG
#undef I_CAN_HAS_LIBJPEG
#endif
#ifdef IIO_DISABLE_LIBTIFF
#undef I_CAN_HAS_LIBTIFF
#endif
#ifdef IIO_DISABLE_LIBHDF5
#undef I_CAN_HAS_LIBHDF5
#endif
#ifdef IIO_DISABLE_LIBWEBP
#undef I_CAN_HAS_LIBWEBP
#endif
#ifdef IIO_DISABLE_LIBHEIF
#undef I_CAN_HAS_LIBHEIF
#endif
#ifdef IIO_DISABLE_LIBAVIF
#undef I_CAN_HAS_LIBAVIF
#endif
#ifdef IIO_DISABLE_IMGLIBS
#undef I_CAN_HAS_LIBPNG
#undef I_CAN_HAS_LIBJPEG
#undef I_CAN_HAS_LIBTIFF
#undef I_CAN_HAS_LIBEXR
#undef I_CAN_HAS_LIBHDF5
#undef I_CAN_HAS_LIBWEBP
#undef I_CAN_HAS_LIBAVIF
#undef I_CAN_HAS_LIBHEIF
#endif
// internal shit
#define IIO_MAX_DIMENSION 20
//
// enum-like, only used internally
//
#define IIO_TYPE_INT8 1
#define IIO_TYPE_UINT8 2
#define IIO_TYPE_INT16 3
#define IIO_TYPE_UINT16 4
#define IIO_TYPE_INT32 5
#define IIO_TYPE_UINT32 6
#define IIO_TYPE_FLOAT 7
#define IIO_TYPE_DOUBLE 8
#define IIO_TYPE_LONGDOUBLE 9
#define IIO_TYPE_INT64 10
#define IIO_TYPE_UINT64 11
#define IIO_TYPE_HALF 12
#define IIO_TYPE_UINT1 13
#define IIO_TYPE_UINT2 14
#define IIO_TYPE_UINT4 15
#define IIO_TYPE_CHAR 16
#define IIO_TYPE_SHORT 17
#define IIO_TYPE_INT 18
#define IIO_TYPE_LONG 19
#define IIO_TYPE_LONGLONG 20
#define IIO_FORMAT_WHATEVER 0
#define IIO_FORMAT_QNM 1
#define IIO_FORMAT_PNG 2
#define IIO_FORMAT_JPEG 3
#define IIO_FORMAT_TIFF 4
#define IIO_FORMAT_RIM 5
#define IIO_FORMAT_BMP 6
#define IIO_FORMAT_EXR 7
#define IIO_FORMAT_JP2 8
#define IIO_FORMAT_VTK 9
#define IIO_FORMAT_CIMG 10
#define IIO_FORMAT_PAU 11
#define IIO_FORMAT_DICOM 12
#define IIO_FORMAT_PFM 13
#define IIO_FORMAT_NIFTI 14
#define IIO_FORMAT_PCX 15
#define IIO_FORMAT_GIF 16
#define IIO_FORMAT_XPM 17
#define IIO_FORMAT_RAFA 18
#define IIO_FORMAT_FLO 19
#define IIO_FORMAT_JUV 20
#define IIO_FORMAT_LUM 21
#define IIO_FORMAT_PCM 22
#define IIO_FORMAT_ASC 23
#define IIO_FORMAT_PDS 24
#define IIO_FORMAT_RAW 25
#define IIO_FORMAT_RWA 26
#define IIO_FORMAT_CSV 27
#define IIO_FORMAT_VRT 28
#define IIO_FORMAT_FFD 29
#define IIO_FORMAT_DLM 30
#define IIO_FORMAT_NPY 31
#define IIO_FORMAT_VIC 32
#define IIO_FORMAT_CCS 33
#define IIO_FORMAT_FIT 34
#define IIO_FORMAT_HDF5 35
#define IIO_FORMAT_TXT 36
#define IIO_FORMAT_RAT 37
#define IIO_FORMAT_WEBP 38
#define IIO_FORMAT_HEIF 39
#define IIO_FORMAT_AVIF 40
#define IIO_FORMAT_UNRECOGNIZED (-1)
//
// sugar
//
#define FORI(n) for(int i=0;i<(int)(n);i++)
#define FORJ(n) for(int j=0;j<(int)(n);j++)
#define FORK(n) for(int k=0;k<(int)(n);k++)
#define FORL(n) for(int l=0;l<(int)(n);l++)
//
// hacks
//
#ifndef __attribute__
# ifndef __GNUC__
# define __attribute__(x) /*NOTHING*/
# endif
#endif
// #includes {{{1
#include <assert.h>
#include <stdbool.h>
#include <stdint.h>
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
#include <stdarg.h>
#include <libgen.h> // needed for dirname() multi-platform
#ifdef __MINGW32__ // needed for tmpfile(), this flag is also set by MINGW64
#include <windows.h>
#endif
#ifdef I_CAN_HAS_LIBPNG
// ugly "feature" in png.h forces this header to be included here
# include <png.h>
#endif
// portabil
#if _POSIX_C_SOURCE >= 200809L
# define I_CAN_HAS_FMEMOPEN 1
#endif
#if _POSIX_C_SOURCE >= 200112L || __OpenBSD__ || __DragonFly__ || __FreeBSD__ || __APPLE__
# define I_CAN_HAS_MKSTEMP 1
#endif
// typedefs {{{1
typedef long long longlong;
typedef long double longdouble;
// utility functions {{{1
#ifndef IIO_ABORT_ON_ERROR
// NOTE: libpng has a nasty "feature" whereby you have to include libpng.h
// before setjmp.h if you want to use both. This induces the following
// hackery:
# ifndef I_CAN_HAS_LIBPNG
# include <setjmp.h>
# endif//I_CAN_HAS_LIBPNG
# if __STDC_VERSION__ >= 201112L
_Thread_local
# endif
jmp_buf global_jump_buffer;
#endif//IIO_ABORT_ON_ERROR
//#include <errno.h> // only for errno
#include <ctype.h> // for isspace
#include <stdlib.h>
#ifdef I_CAN_LINUX
# include <unistd.h>
static const char *emptystring = "";
static const char *myname(void)
{
# define n 0x29a
static char buf[n];
long p = getpid();
snprintf(buf, n, "/proc/%ld/cmdline", p);
FILE *f = fopen(buf, "r");
if (!f) return emptystring;
int c, i = 0;
while ((c = fgetc(f)) != EOF && i < n) {
# undef n
buf[i] = c ? c : ' ';
i += 1;
}
if (i) buf[i-1] = '\0';
fclose(f);
return buf;
}
#else
static const char *myname(void) { return ""; }
#endif//I_CAN_LINUX
static char *xgetenv(const char *s)
{
#ifdef I_CAN_GETENV
return getenv(s);
#else//I_CAN_GETENV
return 0;
#endif// I_CAN_GETENV
}
static void fail(const char *fmt, ...) __attribute__((noreturn,format(printf,1,2)));
static void fail(const char *fmt, ...)
{
va_list argp;
fprintf(stderr, "\nIIO_ERROR(\"%s\"): ", myname());
va_start(argp, fmt);
vfprintf(stderr, fmt, argp);
va_end(argp);
fprintf(stderr, "\n\n");
fflush(NULL);
// if (global_hack_to_never_fail)
// {
// IIO_DEBUG("now wave a dead chicken and press enter\n");
// getchar();
// return;
// }
// exit(43);
#ifndef IIO_ABORT_ON_ERROR
longjmp(global_jump_buffer, 1);
//iio_single_jmpstuff(true, false);
#else//IIO_ABORT_ON_ERROR
exit(xgetenv("IIO_SEGFAULT_ON_ERROR")?*(volatile int*)0:-1);
//# ifdef NDEBUG
// exit(-1);
//# else//NDEBUG
//print_trace(stderr);
// exit(*(int *)0x43);
//# endif//NDEBUG
#endif//IIO_ABORT_ON_ERROR
}
#ifndef IIO_SHOW_DEBUG_MESSAGES
static void do_nop(void *p, ...)
{
va_list argp;
va_start(argp, p);
va_end(argp);
}
#endif
static void *xmalloc(size_t size)
{
if (size == 0)
fail("xmalloc: zero size");
void *p = malloc(size);
if (!p)
{
double sm = size / (0x100000 * 1.0);
fail("xmalloc: out of memory when requesting "
"%zu bytes (%gMB)",//:\"%s\"",
size, sm);//, strerror(errno));
}
return p;
}
static void *xrealloc(void *p, size_t s)
{
void *r = realloc(p, s);
if (!r) fail("realloc failed");
return r;
}
static void xfree(void *p)
{
if (!p)
fail("thou shalt not free a null pointer!");
free(p);
}
# if __STDC_VERSION__ >= 201112L
_Thread_local
# endif
static const
char *global_variable_containing_the_name_of_the_last_opened_file = NULL;
static FILE *xfopen(const char *s, const char *p)
{
global_variable_containing_the_name_of_the_last_opened_file = NULL;
if (!s) fail("trying to open a file with NULL name");
if (0 == strcmp("-", s))
{
if (*p == 'w')
return stdout;
else if (*p == 'r')
return stdin;
else
fail("unknown fopen mode \"%s\"", p);
}
if (0 == strcmp("--", s) && *p == 'w') return stderr;
// NOTE: the 'b' flag is required for I/O on Windows systems
// on unix, it is ignored
char pp[3] = { p[0], 'b', '\0' };
FILE *f = fopen(s, pp);
if (f == NULL)
fail("can not open file \"%s\" in mode \"%s\"",// (%s)",
s, pp);//, strerror(errno));
global_variable_containing_the_name_of_the_last_opened_file = s;
IIO_DEBUG("fopen (%s) = %p\n", s, (void*)f);
return f;
}
static void xfclose(FILE *f)
{
global_variable_containing_the_name_of_the_last_opened_file = NULL;
if (f != stdout && f != stdin && f != stderr) {
IIO_DEBUG("fclose (%p)", (void*)f);
int r = fclose(f);
if (r) fail("fclose error (%d)", r);//\"%s\"",strerror(errno));
}
}
static int pick_char_for_sure(FILE *f)
{
int c = getc(f);
if (EOF == c) {
xfclose(f);
fail("input file ended before expected");
}
//IIO_DEBUG("pcs = '%c'\n", c);
return c;
}
static void eat_spaces(FILE *f)
{
//IIO_DEBUG("inside eat spaces\n");
int c;
do
c = pick_char_for_sure(f);
while (isspace(c));
ungetc(c, f);
}
static void eat_line(FILE *f)
{
//IIO_DEBUG("inside eat line\n");
while (pick_char_for_sure(f) != '\n')
;
}
static void eat_spaces_and_comments(FILE *f)
{
//IIO_DEBUG("inside eat spaces and comments\n");
int c, comment_char = '#';
eat_spaces(f);
uppsala:
c = pick_char_for_sure(f);
if (c == comment_char)
{
eat_line(f);
eat_spaces(f);
} else
ungetc(c, f);
if (c == comment_char) goto uppsala;
}
static void fill_temporary_filename(char *out)
{
#ifdef I_CAN_HAS_MKSTEMP
char tfn[] = "/tmp/iio_tmp_file_XXXXXX\0";
int r = mkstemp(tfn);
if (r == -1) {
perror("hola");
fail("could not create tmp filename");
}
#else
static char buf[L_tmpnam+1];
char *tfn = tmpnam(buf);
#endif//I_CAN_HAS_MKSTEMP
snprintf(out, FILENAME_MAX, "%s", tfn);
}
// struct iio_image { ... }; {{{1
// This struct is used for exchanging image information between internal
// functions. It could be safely eliminated, and this information be passed as
// five or six variables.
struct iio_image {
int dimension; // 1, 2, 3 or 4, typically
int sizes[IIO_MAX_DIMENSION];
int pixel_dimension;
int type; // IIO_TYPE_*
char *rem; // image comment (only used by output functions)
void *data;
};
// struct iio_image management {{{1
static void iio_image_assert_struct_consistency(struct iio_image *x)
{
assert(x->dimension > 0);
assert(x->dimension <= IIO_MAX_DIMENSION);
FORI(x->dimension) assert(x->sizes[i] > 0);
assert(x->pixel_dimension > 0);
switch(x->type) {
case IIO_TYPE_INT8: case IIO_TYPE_UINT8: case IIO_TYPE_INT16:
case IIO_TYPE_UINT16: case IIO_TYPE_INT32: case IIO_TYPE_UINT32:
case IIO_TYPE_FLOAT: case IIO_TYPE_DOUBLE: case IIO_TYPE_LONGDOUBLE:
case IIO_TYPE_INT64: case IIO_TYPE_UINT64: case IIO_TYPE_HALF:
case IIO_TYPE_CHAR: case IIO_TYPE_SHORT: case IIO_TYPE_INT:
case IIO_TYPE_LONG: case IIO_TYPE_LONGLONG: break;
default: assert(false);
}
}
// API
static size_t iio_type_size(int type)
{
switch(type) {
case IIO_TYPE_INT8: return 1;
case IIO_TYPE_UINT8: return 1;
case IIO_TYPE_INT16: return 2;
case IIO_TYPE_UINT16: return 2;
case IIO_TYPE_INT32: return 4;
case IIO_TYPE_UINT32: return 4;
case IIO_TYPE_INT64: return 8;
case IIO_TYPE_UINT64: return 8;
case IIO_TYPE_CHAR: return sizeof(char); // 1
case IIO_TYPE_SHORT: return sizeof(short);
case IIO_TYPE_INT: return sizeof(int);
case IIO_TYPE_LONG: return sizeof(long);
case IIO_TYPE_LONGLONG: return sizeof(long long);
case IIO_TYPE_FLOAT: return sizeof(float);
case IIO_TYPE_DOUBLE: return sizeof(double);
case IIO_TYPE_LONGDOUBLE: return sizeof(long double);
case IIO_TYPE_HALF: return sizeof(float)/2;
default: fail("unrecognized type %d", type);
}
}
// XXX TODO FIXME: this is architecture dependent!
// this function actually requires A LOT of magic to be portable
// the present solution works well for the typical 32 and 64 bit platforms
static int normalize_type(int type_in)
{
int type_out;
switch(type_in) {
case IIO_TYPE_CHAR: type_out = IIO_TYPE_UINT8; break;
case IIO_TYPE_SHORT: type_out = IIO_TYPE_INT16; break;
case IIO_TYPE_INT: type_out = IIO_TYPE_UINT32; break;
default: type_out = type_in; break;
}
if (type_out != type_in) {
// the following assertion fails on many architectures
assert(iio_type_size(type_in) == iio_type_size(type_out));
}
return type_out;
}
// internal API
static
int iio_type_id(size_t sample_size, bool ieeefp_sample, bool signed_sample)
{
if (ieeefp_sample) {
if (signed_sample) fail("signed floats are a no-no!");
switch(sample_size) {
case sizeof(float): return IIO_TYPE_FLOAT;
case sizeof(double): return IIO_TYPE_DOUBLE;
#ifdef I_CAN_HAS_LONGDOUBLE
case sizeof(long double): return IIO_TYPE_LONGDOUBLE;
#endif//I_CAN_HAS_LONGDOUBLE
case sizeof(float)/2: return IIO_TYPE_HALF;
default: fail("bad float size %zu", sample_size);
}
} else {
switch(sample_size) {
case 1: return signed_sample ? IIO_TYPE_INT8 : IIO_TYPE_UINT8;
case 2: return signed_sample ? IIO_TYPE_INT16 : IIO_TYPE_UINT16;
case 4: return signed_sample ? IIO_TYPE_INT32 : IIO_TYPE_UINT32;
case 8: return signed_sample ? IIO_TYPE_INT64 : IIO_TYPE_UINT64;
default: fail("bad integral size %zu", sample_size);
}
}
}
// internal API
static void iio_type_unid(int *size, bool *ieefp, bool *signedness, int type)
{
int t = normalize_type(type);
*size = iio_type_size(t);
*ieefp = (t==IIO_TYPE_HALF || t==IIO_TYPE_FLOAT
|| t==IIO_TYPE_DOUBLE || t==IIO_TYPE_LONGDOUBLE);
*signedness = (t==IIO_TYPE_INT8 || t==IIO_TYPE_INT16
|| t==IIO_TYPE_INT32 || t==IIO_TYPE_INT64);
}
// internal API
static int iio_image_number_of_elements(struct iio_image *x)
{
iio_image_assert_struct_consistency(x);
int r = 1;
FORI(x->dimension) r *= x->sizes[i];
return r;
}
// internal API
static int iio_image_number_of_samples(struct iio_image *x)
{
return iio_image_number_of_elements(x) * x->pixel_dimension;
}
// internal API
static size_t iio_image_sample_size(struct iio_image *x)
{
return iio_type_size(x->type);
}
// internal API
static size_t iio_image_pixel_size(struct iio_image *x)
{
return iio_type_size(x->type) * x->pixel_dimension;
}
// internal API
static size_t iio_image_data_size(struct iio_image *x)
{
return iio_image_sample_size(x) * iio_image_number_of_samples(x);
}
static const char *iio_strtyp(int type)
{
#define M(t) case IIO_TYPE_ ## t: return #t
switch(type) {
M(INT8); M(UINT8); M(INT16); M(UINT16); M(INT32); M(UINT32); M(INT64);
M(UINT64); M(FLOAT); M(DOUBLE); M(LONGDOUBLE); M(HALF); M(UINT1);
M(UINT2); M(UINT4); M(CHAR); M(SHORT); M(INT); M(LONG); M(LONGLONG);
default: return "unrecognized";
}
#undef M
}
static int iio_inttyp(const char *type_name)
{
int n = strlen(type_name);
char utyp[n+1]; utyp[n] = '\0';
for (int i = 0; i < n; i++)
utyp[i] = toupper(type_name[i]);
#define M(t) if(!strcmp(utyp,#t))return IIO_TYPE_ ## t
M(INT8); M(UINT8); M(INT16); M(UINT16); M(INT32); M(UINT32); M(INT64);
M(UINT64); M(FLOAT); M(DOUBLE); M(LONGDOUBLE); M(HALF); M(UINT1);
M(UINT2); M(UINT4); M(CHAR); M(SHORT); M(INT); M(LONG); M(LONGLONG);
#undef M
fail("unrecognized typename \"%s\"", type_name);
}
static const char *iio_strfmt(int format)
{
#define M(f) case IIO_FORMAT_ ## f: return #f
switch(format) {
M(WHATEVER); M(QNM); M(PNG); M(JPEG);
M(TIFF); M(RIM); M(BMP); M(EXR); M(JP2);
M(VTK); M(CIMG); M(PAU); M(DICOM); M(PFM); M(NIFTI);
M(PCX); M(GIF); M(XPM); M(RAFA); M(FLO); M(LUM); M(JUV);
M(PCM); M(ASC); M(RAW); M(RWA); M(PDS); M(CSV); M(VRT); M(RAT);
M(FFD); M(DLM); M(NPY); M(VIC); M(CCS); M(FIT); M(HDF5);
M(TXT); M(WEBP); M(HEIF); M(AVIF);
M(UNRECOGNIZED);
default: fail("caca de la grossa (%d)", format);
}
#undef M
}
//#ifdef IIO_SHOW_DEBUG_MESSAGES
//static void iio_print_image_info(FILE *f, struct iio_image *x)
//{
// fprintf(f, "iio_print_image_info %p\n", (void *)x);
// fprintf(f, "dimension = %d\n", x->dimension);
// int *s = x->sizes;
// switch(x->dimension) {
// case 1: fprintf(f, "size = %d\n", s[0]); break;
// case 2: fprintf(f, "sizes = %dx%d\n", s[0],s[1]); break;
// case 3: fprintf(f, "sizes = %dx%dx%d\n", s[0],s[1],s[2]); break;
// case 4: fprintf(f, "sizes = %dx%dx%dx%d\n", s[0],s[1],s[2],s[3]); break;
// default: fail("unsupported dimension %d", x->dimension);
// }
// fprintf(f, "pixel_dimension = %d\n", x->pixel_dimension);
// fprintf(f, "type = %s\n", iio_strtyp(x->type));
// fprintf(f, "data = %p\n", (void *)x->data);
//}
//#endif//IIO_SHOW_DEBUG_MESSAGES
static void iio_image_fill(struct iio_image *x,
int dimension, int *sizes,
int type, int pixel_dimension)
{
x->dimension = dimension;
FORI(dimension) x->sizes[i] = sizes[i];
x->type = type;
x->pixel_dimension = pixel_dimension;
x->data = NULL;
x->rem = NULL;
}
static void iio_wrap_image_struct_around_data(struct iio_image *x,
int dimension, int *sizes, int pixel_dimension,
int type, void *data)
{
assert(dimension < IIO_MAX_DIMENSION);
x->dimension = dimension;
FORI(x->dimension) x->sizes[i] = sizes[i];
x->pixel_dimension = pixel_dimension;
x->type = type;
x->data = data;
x->rem = NULL;
}
static void iio_image_build_independent(struct iio_image *x,
int dimension, int *sizes, int type, int pixel_dimension)
{
assert(dimension > 0);
assert(dimension <= 4);
assert(pixel_dimension > 0);
iio_image_fill(x, dimension, sizes, type, pixel_dimension);
size_t datalength = 1; FORI(dimension) datalength *= sizes[i];
size_t datasize = datalength * iio_type_size(type) * pixel_dimension;
x->data = xmalloc(datasize);
}
static void iio_image_init2d(struct iio_image *x,
int w, int h, int pd, int type)
{
x->dimension = 2;
x->sizes[0] = w;
x->sizes[1] = h;
x->pixel_dimension = pd;
x->type = type;
x->data = NULL;
x->rem = NULL;
}
static void inplace_swap_pixels(struct iio_image *x, int i, int j, int a, int b)
{
if (x->dimension != 2)
fail("can only flip 2-dimensional images");
int w = x->sizes[0];
//int h = x->sizes[1]; // unused
int pixsize = x->pixel_dimension * iio_image_sample_size(x);
uint8_t *p = (i + j * w) * pixsize + (uint8_t*)x->data;
uint8_t *q = (a + b * w) * pixsize + (uint8_t*)x->data;
for (int k = 0; k < pixsize; k++)
{
uint8_t tmp = p[k];
p[k] = q[k];
q[k] = tmp;
}
}
static void inplace_flip_horizontal(struct iio_image *x)
{
int w = x->sizes[0];
int h = x->sizes[1];
for (int j = 0; j < h; j++)
for (int i = 0; i < w/2; i++)
inplace_swap_pixels(x, i, j, w - i - 1, j);
}
static void inplace_flip_vertical(struct iio_image *x)
{
int w = x->sizes[0];
int h = x->sizes[1];
for (int j = 0; j < h/2; j++)
for (int i = 0; i < w; i++)
inplace_swap_pixels(x, i, j, i, h - j - 1);
}
static void inplace_transpose(struct iio_image *x)
{
int w = x->sizes[0];
int h = x->sizes[1];
if (w != h)
{
void rectangular_not_inplace_transpose(struct iio_image*);
rectangular_not_inplace_transpose(x);
} else {
for (int i = 0; i < w; i++)
for (int j = 0; j < i; j++)
inplace_swap_pixels(x, i, j, j, i);
}
}
static void inplace_reorient(struct iio_image *x, int orientation)
{
int orx = orientation & 0xff;
int ory = (orientation & 0xff00)/0x100;
if (isupper(orx))
inplace_flip_horizontal(x);
if (isupper(ory))
inplace_flip_vertical(x);
if (toupper(orx) > toupper(ory))
inplace_transpose(x);
}
static int insideP(int w, int h, int i, int j)
{
return i>=0 && j>=0 && i<w && j<h;
}
static void inplace_trim(struct iio_image *x,
int trim_left, int trim_bottom, int trim_right, int trim_top)
{
IIO_DEBUG("inplace trim (%dx%d) le=%d bo=%d ri=%d to=%d\n",
x->sizes[0], x->sizes[1],
trim_left, trim_bottom, trim_right, trim_top);
assert(2 == x->dimension);
int pd = x->pixel_dimension;
int ss = iio_image_sample_size(x);
int ps = pd * ss;
int w = x->sizes[0];
int h = x->sizes[1];
int nw = w - trim_left - trim_right; // new width
int nh = h - trim_bottom - trim_top; // new height
assert(nw > 0 && nh > 0);
char *old_data = x->data;
char *new_data = xmalloc(nw * nh * ps);
if (ss == sizeof(float))
for (int i = 0; i < nw*nh*pd; i++)
((float*)new_data)[i] = 0.0f/0.0f;
else if (ss == sizeof(double))
for (int i = 0; i < nw*nh*pd; i++)
((double*)new_data)[i] = 0.0f/0.0f;
else
for (int i = 0; i < nw*nh*ps; i++)
((char*)new_data)[i] = 0;
for (int j = 0; j < nh; j++)
for (int i = 0; i < nw; i++)
if (insideP(w, h, i+trim_left, j+trim_top))
memcpy(
new_data + ps * (j*nw+i),
old_data + ps * ((j+trim_top)*w+(i+trim_left)),
ps
);
x->sizes[0] = nw;
x->sizes[1] = nh;
x->data = new_data;
xfree(old_data);
}
void rectangular_not_inplace_transpose(struct iio_image *x)
{
assert(2 == x->dimension);
int ps = x->pixel_dimension * iio_image_sample_size(x); // pixel_size
int w = x->sizes[0];
int h = x->sizes[1];
int nw = h;
int nh = w;
char *old_data = x->data;
char *new_data = xmalloc(nw * nh * ps);
for (int i = 0; i < nw*nh*ps; i++)
((char*)new_data)[i] = 1;
for (int j = 0; j < nh; j++)
for (int i = 0; i < nw; i++)
memcpy(
new_data + ps * (j*nw + i),
old_data + ps * (i*w + j),
ps
);
x->sizes[0] = nw;
x->sizes[1] = nh;
x->data = new_data;
xfree(old_data);
}
void general_copy3d_with_transposition(
void *y, // output buffer
void *x, // input buffer
int v[3], // output dimensions
int u[3], // input dimensions (in C-order)
int s, // element size in bytes
char *t // tranformation, e,g, "xZy" swaps xy, inverts Z
)
{
int w = u[0]; // "x"
int h = u[1]; // "y"
int d = u[2]; // "z"
char (*X)[h][w][s] = x;
if (0 == strcmp(t, "xyz")) {
char (*Y)[h][w][s] = y; // "z" does not appear here
for (int k = 0; k < d; k++) // these three loops don't change
for (int j = 0; j < h; j++) //
for (int i = 0; i < w; i++) //
memcpy(Y[k][j][i], X[k][j][i], s); // set arguments of Y
v[0] = w; v[1] = h; v[2] = d; // set sizes accordingly
} else if (0 == strcmp(t, "yxz")) {
char (*Y)[w][h][s] = y;
FORK(d) FORJ(h) FORI(w) memcpy(Y[k][i][j], X[k][j][i], s);
v[0] = h; v[1] = w; v[2] = d;
} else if (0 == strcmp(t, "xzy")) {
char (*Y)[d][w][s] = y;
FORK(d) FORJ(h) FORI(w) memcpy(Y[j][k][i], X[k][j][i], s);
v[0] = w; v[1] = d; v[2] = h;
} else if (0 == strcmp(t, "zxy")) {
char (*Y)[w][d][s] = y;
FORK(d) FORJ(h) FORI(w) memcpy(Y[j][i][k], X[k][j][i], s);
v[0] = d; v[1] = w; v[2] = h;
} else if (0 == strcmp(t, "zyx")) {
char (*Y)[h][d][s] = y;
FORK(d) FORJ(h) FORI(w) memcpy(Y[i][j][k], X[k][j][i], s);
v[0] = d; v[1] = h; v[2] = w;
} else if (0 == strcmp(t, "yzx")) {
char (*Y)[d][h][s] = y;
FORK(d) FORJ(h) FORI(w) memcpy(Y[i][k][j], X[k][j][i], s);
v[0] = h; v[1] = d; v[2] = w;
} else fail("unrecognized trasnposition string \"%s\"", t);
// TODO: build a macro to write all this code
// TODO 2: add reversals along each dimension (total of 6x8=48 modes)
}
static void inplace_3dreorient(struct iio_image *x, char *s)
{
if (x->dimension != 2) fail("TODO: implement some squeezing here");
IIO_DEBUG("3dflip %dx%d %d \"%s\"\n", x->sizes[0], x->sizes[1],
x->pixel_dimension, s);
char *t = xmalloc(iio_image_data_size(x));
int z[3] = {x->pixel_dimension, x->sizes[0], x->sizes[1]};
int Z[3];
general_copy3d_with_transposition(t, x->data, Z, z,
iio_image_sample_size(x), s);
memcpy(x->data, t, iio_image_data_size(x));
xfree(t);
x->sizes[0] = Z[1];
x->sizes[1] = Z[2];
x->pixel_dimension = Z[0];
}
// data conversion {{{1
// macros to crop a numeric value
#define T0(x) ((x)>0?(x):0)
#define T8(x) ((x)>0?((x)<0xff?(x):0xff):0)
#define T6(x) ((x)>0?((x)<0xffff?(x):0xffff):0)
#define CC(a,b) (77*(a)+(b)) // hash number of a conversion pair
#define I8 IIO_TYPE_INT8
#define U8 IIO_TYPE_UINT8
#define I6 IIO_TYPE_INT16
#define U6 IIO_TYPE_UINT16
#define I2 IIO_TYPE_INT32
#define U2 IIO_TYPE_UINT32
#define I4 IIO_TYPE_INT64
#define U4 IIO_TYPE_UINT64
#define F4 IIO_TYPE_FLOAT
#define F8 IIO_TYPE_DOUBLE
#define F6 IIO_TYPE_LONGDOUBLE
static void convert_datum(void *dest, void *src, int dest_fmt, int src_fmt)
{
// NOTE: verify that this switch is optimized outside of the loop in
// which it is contained. Otherwise, produce some self-modifying code
// here.
switch(CC(dest_fmt,src_fmt)) {
// change of sign (lossless, but changes interpretation)
case CC(I8,U8): *( int8_t*)dest = *( uint8_t*)src; break;
case CC(I6,U6): *( int16_t*)dest = *(uint16_t*)src; break;
case CC(I2,U2): *( int32_t*)dest = *(uint32_t*)src; break;
case CC(U8,I8): *( uint8_t*)dest = *( int8_t*)src; break;
case CC(U6,I6): *(uint16_t*)dest = *( int16_t*)src; break;
case CC(U2,I2): *(uint32_t*)dest = *( int32_t*)src; break;
// different size signed integers (3 lossy, 3 lossless)
case CC(I8,I6): *( int8_t*)dest = *( int16_t*)src; break;//iw810
case CC(I8,I2): *( int8_t*)dest = *( int32_t*)src; break;//iw810
case CC(I6,I2): *( int16_t*)dest = *( int32_t*)src; break;//iw810
case CC(I6,I8): *( int16_t*)dest = *( int8_t*)src; break;
case CC(I2,I8): *( int32_t*)dest = *( int8_t*)src; break;
case CC(I2,I6): *( int32_t*)dest = *( int16_t*)src; break;
// different size unsigned integers (3 lossy, 3 lossless)
case CC(U8,U6): *( uint8_t*)dest = T8(*(uint16_t*)src); break;//iw810