v0.12.0

Features

• add varlociraptor test case generation (#429) (3ec7975)

Bug Fixes

• update the mutations columns in the overview table formatter (#423) (3af43b9)

v0.11.0

Features

• update to rust-bio-tools 0.33 (#388) (8f66915)
• update to varlociraptor 4.9 (#424) (5a7ca5b)

v0.10.2

Bug Fixes

• pangolin input for overview table, bamclipper samtools error, include flag for high quality genome report (#418) (9690f12)

v0.10.1

Bug Fixes

• names in report (#410) (e5dbcbd)

v0.10.0

Features

• complete workflow if no samples pass the quality filter (#411) (55b2dcc)

v0.9.0

Features

• added variants-over-time-plot to report again (#405) (bd5048a)

v0.8.0

Features

• add pangolin call table (#397) (953211a)
• add rki include/exclude flag (#319) (d2e6d20)
• added column in overview table for the clear name of the lineage (#400) (38e34bb)

Bug Fixes

• change report structure, add masked sequence, pangolin call on polished sequence (#396) (d2ecaaa)
• rmv pipe from pre-commit (#401) (3222bb2)

v0.7.0

Features

• add pre commit checks (#398) (6982b3d)

Bug Fixes

• remove cwd-check in update sample sheet script (#393) (44d49d3)
• trigger docs build on release created (#391) (e240aeb)

v0.6.0

Features

• update pangolin to 3.1.17 (#389) (23ed39e)
• update varlociraptor to version 4.8 (#331) (0096376)

Bug Fixes

• generation of high quality genomes (#394) (da00975)
• relative aggregation of samples for variants and lineages over time plots (#382) (ebe556c)

v0.5.0

Features

• technology: add ion torrent processing (#383) (288777c)