From 08361e72b075c2ce16b1f705688be0f75cc50dfd Mon Sep 17 00:00:00 2001
From: "github-actions[bot]"
 <41898282+github-actions[bot]@users.noreply.github.com>
Date: Thu, 16 Nov 2023 13:37:47 +0000
Subject: [PATCH 1/2] chore(master): release 0.16.0

---
 CHANGELOG.md | 23 +++++++++++++++++++++++
 version.txt  |  2 +-
 2 files changed, 24 insertions(+), 1 deletion(-)

diff --git a/CHANGELOG.md b/CHANGELOG.md
index ac27577d..5f16dd03 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -1,5 +1,28 @@
 # Changelog
 
+## [0.16.0](https://github.com/IKIM-Essen/uncovar/compare/v0.15.1...v0.16.0) (2023-11-16)
+
+
+### Features
+
+* Update README.md for dark/light theme ([#614](https://github.com/IKIM-Essen/uncovar/issues/614)) ([33ac5f7](https://github.com/IKIM-Essen/uncovar/commit/33ac5f7b4f7af8bbb500e9f531ccbdc45ac9427f))
+
+
+### Bug Fixes
+
+* changes in path requirements for snakedeploy ([#590](https://github.com/IKIM-Essen/uncovar/issues/590)) ([406d456](https://github.com/IKIM-Essen/uncovar/commit/406d456edd15715f7e14338b8195d2a09a807e49))
+* improved clonality event definition, usage of major subclone for assembly polishing; upgrade to varlociraptor 6.0 ([#585](https://github.com/IKIM-Essen/uncovar/issues/585)) ([aced95e](https://github.com/IKIM-Essen/uncovar/commit/aced95e798fd0483e99120550f49614e680f56dd))
+* QA genome generation ([#613](https://github.com/IKIM-Essen/uncovar/issues/613)) ([2bb74bf](https://github.com/IKIM-Essen/uncovar/commit/2bb74bfc26dee80af7d04089aafe636ea7c6d76a))
+* switch from jupyter notebook to script ([#598](https://github.com/IKIM-Essen/uncovar/issues/598)) ([d0f293d](https://github.com/IKIM-Essen/uncovar/commit/d0f293d2b8136fb0d8ef3753733ab1d30fb20d56))
+* update multiqc ([#607](https://github.com/IKIM-Essen/uncovar/issues/607)) ([0070d89](https://github.com/IKIM-Essen/uncovar/commit/0070d8927290dd01f418b876b60f3405158f1ab9))
+* use homopolymer-pair-HMM-mode of Varlociraptor in case of nanopore reads ([505a271](https://github.com/IKIM-Essen/uncovar/commit/505a2714ba0e5642312051f5e5154f7d454ff57f))
+* use homopolymer-pair-HMM-mode of Varlociraptor in case of nanopore reads ([#587](https://github.com/IKIM-Essen/uncovar/issues/587)) ([9bc814f](https://github.com/IKIM-Essen/uncovar/commit/9bc814f7cb9e9d9e53d557d463e782801070b46e))
+
+
+### Performance Improvements
+
+* update to varlociraptor 8.4 ([#596](https://github.com/IKIM-Essen/uncovar/issues/596)) ([34701af](https://github.com/IKIM-Essen/uncovar/commit/34701af485aa1ec199a418ec1487a97677f624ca))
+
 ## [0.15.1](https://github.com/IKIM-Essen/uncovar/compare/v0.15.0...v0.15.1) (2022-11-30)
 
 
diff --git a/version.txt b/version.txt
index e815b861..04a373ef 100644
--- a/version.txt
+++ b/version.txt
@@ -1 +1 @@
-0.15.1
+0.16.0

From 8fc483f082776f62f6f20d15c0dd82e8143ee87e Mon Sep 17 00:00:00 2001
From: "github-actions[bot]" <github-actions[bot]@users.noreply.github.com>
Date: Thu, 16 Nov 2023 13:37:53 +0000
Subject: [PATCH 2/2] Changed containerized tag to 0.16.0

---
 workflow/Snakefile | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/workflow/Snakefile b/workflow/Snakefile
index d8f339ce..cd146b36 100644
--- a/workflow/Snakefile
+++ b/workflow/Snakefile
@@ -21,7 +21,7 @@ report: "report/workflow.rst"
 container: "docker://condaforge/mambaforge"
 
 
-containerized: "quay.io/uncovar/uncovar#0.15.1"
+containerized: "quay.io/uncovar/uncovar#0.16.0"
 
 
 include: "rules/common.smk"