fix: update multiqc #607

alethomas · 2023-10-25T11:29:15Z

Description

update multiqc to fix ci

I've formatted the PR title in accordance with the structure of the conventional commit messages.
I've updated the code style using pre-commit if needed.
I've updated or supplemented the documentation as needed.
I've read the CODE_OF_CONDUCT.md document.
I've read the CONTRIBUTING.md guide.

workflow/rules/qc.smk

alethomas added 13 commits October 25, 2023 11:27

update multiqc

c89b3ce

change action with pinned python version

8c5eb23

re-implement ont testing

b10d5c4

update multiqc

4416f8a

leave old fastqc version

b955ba9

input only one fastq file

0162995

update fastqc and add resources

22a6ecb

add new input rule for only one fastq file

c54752e

fmt

979a1df

fmt

b7b0231

fmt

eb2d953

update multiqc

5aaaa0c

exclude kraken input

90a8aa5

alethomas requested a review from johanneskoester October 30, 2023 15:04

johanneskoester requested changes Oct 30, 2023

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iclude TODO for kraken in multiqc

c5203f8

alethomas requested a review from johanneskoester October 31, 2023 10:26

johanneskoester approved these changes Oct 31, 2023

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alethomas merged commit 0070d89 into master Oct 31, 2023
26 checks passed

alethomas deleted the fix/update_packages branch October 31, 2023 13:33

github-actions bot mentioned this pull request Oct 31, 2023

chore(master): release 0.16.0 #586

Merged