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New alignment methods #797

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oierlauzi
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Preliminary version of the particle alignment method using FAISS library.

The following programs were introduced:

  • swiftalign_wiener_2d: Torch implementation of the Wiener CTF correction
  • swiftalign_train: Trains a database with a representative subset of its data
  • swiftalign_query: Populate and query experimental images from the database

@oierlauzi oierlauzi mentioned this pull request Jul 31, 2023
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@oierlauzi oierlauzi marked this pull request as ready for review July 31, 2023 09:05
cossorzano
cossorzano previously approved these changes Aug 8, 2023
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sonarcloud bot commented Aug 29, 2023

Kudos, SonarCloud Quality Gate passed!    Quality Gate passed

Bug A 0 Bugs
Vulnerability A 0 Vulnerabilities
Security Hotspot A 0 Security Hotspots
Code Smell A 0 Code Smells

No Coverage information No Coverage information
No Duplication information No Duplication information

warning The version of Java (11.0.3) you have used to run this analysis is deprecated and we will stop accepting it soon. Please update to at least Java 17.
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sonarcloud bot commented Sep 6, 2023

SonarCloud Quality Gate failed.    Quality Gate failed

Bug E 7 Bugs
Vulnerability A 0 Vulnerabilities
Security Hotspot E 1 Security Hotspot
Code Smell A 383 Code Smells

No Coverage information No Coverage information
1.2% 1.2% Duplication

idea Catch issues before they fail your Quality Gate with our IDE extension sonarlint SonarLint

@albertmena albertmena marked this pull request as draft September 29, 2023 08:35
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sonarcloud bot commented May 16, 2024

Quality Gate Failed Quality Gate failed

Failed conditions
C Reliability Rating on New Code (required ≥ A)

See analysis details on SonarCloud

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@cossorzano cossorzano cossorzano left review comments

@albertmena albertmena Awaiting requested review from albertmena

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@oierlauzi @cossorzano @albertmena