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CI.yml
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name: TSMP2 Build
# Controls when the action will run.
on:
push:
branches: [ master ]
pull_request:
branches: [ master ]
jobs:
eclm_build_job:
name: ${{ matrix.config.name }}
runs-on: ${{ matrix.os }}
strategy:
matrix:
os: [ ubuntu-22.04 ]
config:
- {
name: "eCLM-ParFlow",
}
env:
CC: mpicc
CXX: mpicxx
FC: mpifort
F77: mpif77
BUILD_DIR: bld
INSTALL_DIR: install
MODEL_DIR: ${{ github.workspace }}/component-models
VER_OASIS: tsmp-patches-v0.1
VER_eCLM: beta-0.1
VER_PARFLOW: ed3974987902ef24c1f7519eb0ba5f8f66380c8c # points to commit "Supported Ubuntu 24.04 and added LLVM to CI"
VER_HYPRE: 2.26.0
VER_NETCDF_C: 4.9.2
VER_NETCDF_F90: 4.6.1
CMAKE_PREFIX_PATH: ${{ github.workspace }}/dependencies
SYSTEMNAME: ${{ matrix.os }}
steps:
- uses: actions/checkout@v4
- name: Install TSMP2 dependencies on Ubuntu
uses: awalsh128/cache-apt-pkgs-action@latest
with:
packages: libxml++2.6-dev pylint wget cmake libpnetcdf-dev tcl-dev tk-dev
version: 1.0
execute_install_scripts: true
- name: Download HDF5 headers and MPI Fortran compiler
run: |
sudo apt-get update
sudo apt-get install gfortran openmpi-bin libopenmpi-dev libhdf5-openmpi-dev libhdf5-openmpi-103 hdf5-helpers
- name: Create directories for component model and dependencies
run: |
mkdir -p ${CMAKE_PREFIX_PATH} ${MODEL_DIR}
#
# NetCDF C
#
- name: Restore cached NetCDF C ${{ env.VER_NETCDF_C }}
uses: actions/cache/restore@v4
id: cache-netcdf-restore
with:
path: ${{ env.CMAKE_PREFIX_PATH }}
key: cache-${{ matrix.config.name }}-${{ env.VER_NETCDF_C }}
- if: steps.cache-netcdf-restore.outputs.cache-hit != 'true'
name: Install NetCDF C ${{ env.VER_NETCDF_C }}
run: |
wget https://github.com/Unidata/netcdf-c/archive/v${VER_NETCDF_C}.tar.gz
tar xf v${VER_NETCDF_C}.tar.gz
cd netcdf-c-${VER_NETCDF_C}
export CPPFLAGS=-I/usr/include/hdf5/openmpi
export LDFLAGS=-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi
./configure --prefix=$(realpath $CMAKE_PREFIX_PATH)
make -j4 install
- if: steps.cache-netcdf-restore.outputs.cache-hit != 'true'
name: Cache NetCDF ${{ env.VER_NETCDF_C }}
uses: actions/cache/save@v4
with:
path: ${{ env.CMAKE_PREFIX_PATH }}
key: cache-${{ matrix.config.name }}-${{ env.VER_NETCDF_C }}
#
# NetCDF Fortran
#
- name: Restore cached NetCDF Fortran ${{ env.VER_NETCDF_F90 }}
uses: actions/cache/restore@v4
id: cache-netcdff90-restore
with:
path: ${{ env.CMAKE_PREFIX_PATH }}
key: cache-${{ matrix.config.name }}-${{ env.VER_NETCDF_F90 }}
- if: steps.cache-netcdff90-restore.outputs.cache-hit != 'true'
name: Install NetCDF Fortran ${{ env.VER_NETCDF_F90 }}
run: |
wget https://github.com/Unidata/netcdf-fortran/archive/v${VER_NETCDF_F90}.tar.gz
tar xf v${VER_NETCDF_F90}.tar.gz
cd netcdf-fortran-${VER_NETCDF_F90}
export CPPFLAGS=-I${CMAKE_PREFIX_PATH}/include
export LDFLAGS=-L${CMAKE_PREFIX_PATH}/lib
./configure --prefix=$(realpath $CMAKE_PREFIX_PATH)
make -j4 install
- if: steps.cache-netcdff90-restore.outputs.cache-hit != 'true'
name: Cache NetCDF Fortran ${{ env.VER_NETCDF_F90 }}
uses: actions/cache/save@v4
with:
path: ${{ env.CMAKE_PREFIX_PATH }}
key: cache-${{ matrix.config.name }}-${{ env.VER_NETCDF_F90 }}
#
# OASIS3-MCT
#
- name: Restore cached OASIS3-MCT ${{ env.VER_OASIS }}
uses: actions/cache/restore@v4
id: cache-oasis-restore
with:
path: ${{ env.MODEL_DIR }}/oasis3-mct
key: cache-${{ matrix.config.name }}-${{ env.VER_OASIS }}
- if: steps.cache-oasis-restore.outputs.cache-hit != 'true'
name: Download OASIS3-MCT ${{ env.VER_OASIS }}
working-directory: ${{ env.MODEL_DIR }}
run: |
git clone -b $VER_OASIS https://icg4geo.icg.kfa-juelich.de/ExternalReposPublic/oasis3-mct.git
echo "OASIS3-MCT version: $(cd oasis3-mct && git describe --tags --always)"
- if: steps.cache-oasis-restore.outputs.cache-hit != 'true'
name: Cache OASIS3-MCT ${{ env.VER_OASIS }}
uses: actions/cache/save@v4
with:
path: ${{ env.MODEL_DIR }}/oasis3-mct
key: cache-${{ matrix.config.name }}-${{ env.VER_OASIS }}
#
# eCLM
#
- name: Restore cached eCLM ${{ env.VER_eCLM }}
uses: actions/cache/restore@v4
id: cache-eclm-restore
with:
path: ${{ env.MODEL_DIR }}/eCLM
key: cache-${{ matrix.config.name }}-${{ env.VER_eCLM }}
- if: steps.cache-eclm-restore.outputs.cache-hit != 'true'
name: Download eCLM ${{ env.VER_eCLM }}
working-directory: ${{ env.MODEL_DIR }}
run: |
git clone -b $VER_eCLM https://github.com/HPSCTerrSys/eCLM.git
echo "eCLM version: $(cd eCLM && git describe --tags --always)"
- if: steps.cache-eclm-restore.outputs.cache-hit != 'true'
name: Cache eCLM ${{ env.VER_eCLM }}
uses: actions/cache/save@v4
with:
path: ${{ env.MODEL_DIR }}/eCLM
key: cache-${{ matrix.config.name }}-${{ env.VER_eCLM }}
#
# ParFlow
#
- name: Restore cached ParFlow ${{ env.VER_PARFLOW }}
uses: actions/cache/restore@v4
id: cache-parflow-restore
with:
path: ${{ env.MODEL_DIR }}/parflow
key: cache-${{ matrix.config.name }}-${{ env.VER_PARFLOW }}
# TODO: Must use upstream repo https://github.com/parflow/parflow.git
- if: steps.cache-parflow-restore.outputs.cache-hit != 'true'
name: Download ParFlow ${{ env.VER_PARFLOW }}
working-directory: ${{ env.MODEL_DIR }}
run: |
git clone https://github.com/parflow/parflow.git
cd parflow
git checkout $VER_PARFLOW
echo "ParFlow version: $(git describe --tags --always)"
- if: steps.cache-parflow-restore.outputs.cache-hit != 'true'
name: Cache ParFlow ${{ env.VER_PARFLOW }}
uses: actions/cache/save@v4
with:
path: ${{ env.MODEL_DIR }}/parflow
key: cache-${{ matrix.config.name }}-${{ env.VER_PARFLOW }}
#
# Hypre
#
- name: Restore cached Hypre ${{ env.VER_HYPRE }}
uses: actions/cache/restore@v4
id: cache-hypre-restore
with:
path: ${{ env.CMAKE_PREFIX_PATH }}
key: cache-${{ matrix.config.name }}-${{ env.VER_HYPRE }}
- if: steps.cache-hypre-restore.outputs.cache-hit != 'true'
name: Install Hypre ${{ env.VER_HYPRE }}
run: |
wget https://github.com/hypre-space/hypre/archive/v${VER_HYPRE}.tar.gz
tar xf v${VER_HYPRE}.tar.gz
cd hypre-${VER_HYPRE}/src
./configure --prefix=$(realpath $CMAKE_PREFIX_PATH)
make -j4 install
- if: steps.cache-hypre-restore.outputs.cache-hit != 'true'
name: Cache Hypre ${{ env.VER_HYPRE }}
uses: actions/cache/save@v4
with:
path: ${{ env.CMAKE_PREFIX_PATH }}
key: cache-${{ matrix.config.name }}-${{ env.VER_HYPRE }}
#
# TSMP2
#
- name: Configure TSMP2
run: >-
cmake -S . -B ${BUILD_DIR}
-DCMAKE_BUILD_TYPE="RELEASE"
-DCMAKE_INSTALL_PREFIX=${INSTALL_DIR}
-DOASIS_SRC=${MODEL_DIR}/oasis3-mct
-DeCLM="ON"
-DeCLM_SRC=${MODEL_DIR}/eCLM
-DParFlow="ON"
-DPARFLOW_SRC=${MODEL_DIR}/parflow
- name: Build TSMP2
run: |
cmake --build ${BUILD_DIR}
- name: Install TSMP2
run: |
cmake --install ${BUILD_DIR}