Fixed bugs, made POSIX compliant, clearer messages (#47) #90
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| name: TSMP2 Build | |
| # Controls when the action will run. | |
| on: | |
| push: | |
| branches: [ master ] | |
| pull_request: | |
| branches: [ master ] | |
| jobs: | |
| eclm_build_job: | |
| name: ${{ matrix.config.name }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: [ ubuntu-22.04 ] | |
| config: | |
| - { | |
| name: "eCLM-ParFlow", | |
| } | |
| env: | |
| CC: mpicc | |
| CXX: mpicxx | |
| FC: mpifort | |
| F77: mpif77 | |
| BUILD_DIR: bld | |
| INSTALL_DIR: install | |
| MODEL_DIR: ${{ github.workspace }}/component-models | |
| VER_OASIS: tsmp-patches-v0.1 | |
| VER_eCLM: beta-0.1 | |
| VER_PARFLOW: ed3974987902ef24c1f7519eb0ba5f8f66380c8c # points to commit "Supported Ubuntu 24.04 and added LLVM to CI" | |
| VER_HYPRE: 2.26.0 | |
| VER_NETCDF_C: 4.9.2 | |
| VER_NETCDF_F90: 4.6.1 | |
| CMAKE_PREFIX_PATH: ${{ github.workspace }}/dependencies | |
| SYSTEMNAME: ${{ matrix.os }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Install TSMP2 dependencies on Ubuntu | |
| uses: awalsh128/cache-apt-pkgs-action@latest | |
| with: | |
| packages: libxml++2.6-dev pylint wget cmake libpnetcdf-dev tcl-dev tk-dev | |
| version: 1.0 | |
| execute_install_scripts: true | |
| - name: Download HDF5 headers and MPI Fortran compiler | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install gfortran openmpi-bin libopenmpi-dev libhdf5-openmpi-dev libhdf5-openmpi-103 hdf5-helpers | |
| - name: Create directories for component model and dependencies | |
| run: | | |
| mkdir -p ${CMAKE_PREFIX_PATH} ${MODEL_DIR} | |
| # | |
| # NetCDF C | |
| # | |
| - name: Restore cached NetCDF C ${{ env.VER_NETCDF_C }} | |
| uses: actions/cache/restore@v4 | |
| id: cache-netcdf-restore | |
| with: | |
| path: ${{ env.CMAKE_PREFIX_PATH }} | |
| key: cache-${{ matrix.config.name }}-${{ env.VER_NETCDF_C }} | |
| - if: steps.cache-netcdf-restore.outputs.cache-hit != 'true' | |
| name: Install NetCDF C ${{ env.VER_NETCDF_C }} | |
| run: | | |
| wget https://github.com/Unidata/netcdf-c/archive/v${VER_NETCDF_C}.tar.gz | |
| tar xf v${VER_NETCDF_C}.tar.gz | |
| cd netcdf-c-${VER_NETCDF_C} | |
| export CPPFLAGS=-I/usr/include/hdf5/openmpi | |
| export LDFLAGS=-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi | |
| ./configure --prefix=$(realpath $CMAKE_PREFIX_PATH) | |
| make -j4 install | |
| - if: steps.cache-netcdf-restore.outputs.cache-hit != 'true' | |
| name: Cache NetCDF ${{ env.VER_NETCDF_C }} | |
| uses: actions/cache/save@v4 | |
| with: | |
| path: ${{ env.CMAKE_PREFIX_PATH }} | |
| key: cache-${{ matrix.config.name }}-${{ env.VER_NETCDF_C }} | |
| # | |
| # NetCDF Fortran | |
| # | |
| - name: Restore cached NetCDF Fortran ${{ env.VER_NETCDF_F90 }} | |
| uses: actions/cache/restore@v4 | |
| id: cache-netcdff90-restore | |
| with: | |
| path: ${{ env.CMAKE_PREFIX_PATH }} | |
| key: cache-${{ matrix.config.name }}-${{ env.VER_NETCDF_F90 }} | |
| - if: steps.cache-netcdff90-restore.outputs.cache-hit != 'true' | |
| name: Install NetCDF Fortran ${{ env.VER_NETCDF_F90 }} | |
| run: | | |
| wget https://github.com/Unidata/netcdf-fortran/archive/v${VER_NETCDF_F90}.tar.gz | |
| tar xf v${VER_NETCDF_F90}.tar.gz | |
| cd netcdf-fortran-${VER_NETCDF_F90} | |
| export CPPFLAGS=-I${CMAKE_PREFIX_PATH}/include | |
| export LDFLAGS=-L${CMAKE_PREFIX_PATH}/lib | |
| ./configure --prefix=$(realpath $CMAKE_PREFIX_PATH) | |
| make -j4 install | |
| - if: steps.cache-netcdff90-restore.outputs.cache-hit != 'true' | |
| name: Cache NetCDF Fortran ${{ env.VER_NETCDF_F90 }} | |
| uses: actions/cache/save@v4 | |
| with: | |
| path: ${{ env.CMAKE_PREFIX_PATH }} | |
| key: cache-${{ matrix.config.name }}-${{ env.VER_NETCDF_F90 }} | |
| # | |
| # OASIS3-MCT | |
| # | |
| - name: Restore cached OASIS3-MCT ${{ env.VER_OASIS }} | |
| uses: actions/cache/restore@v4 | |
| id: cache-oasis-restore | |
| with: | |
| path: ${{ env.MODEL_DIR }}/oasis3-mct | |
| key: cache-${{ matrix.config.name }}-${{ env.VER_OASIS }} | |
| - if: steps.cache-oasis-restore.outputs.cache-hit != 'true' | |
| name: Download OASIS3-MCT ${{ env.VER_OASIS }} | |
| working-directory: ${{ env.MODEL_DIR }} | |
| run: | | |
| git clone -b $VER_OASIS https://icg4geo.icg.kfa-juelich.de/ExternalReposPublic/oasis3-mct.git | |
| echo "OASIS3-MCT version: $(cd oasis3-mct && git describe --tags --always)" | |
| - if: steps.cache-oasis-restore.outputs.cache-hit != 'true' | |
| name: Cache OASIS3-MCT ${{ env.VER_OASIS }} | |
| uses: actions/cache/save@v4 | |
| with: | |
| path: ${{ env.MODEL_DIR }}/oasis3-mct | |
| key: cache-${{ matrix.config.name }}-${{ env.VER_OASIS }} | |
| # | |
| # eCLM | |
| # | |
| - name: Restore cached eCLM ${{ env.VER_eCLM }} | |
| uses: actions/cache/restore@v4 | |
| id: cache-eclm-restore | |
| with: | |
| path: ${{ env.MODEL_DIR }}/eCLM | |
| key: cache-${{ matrix.config.name }}-${{ env.VER_eCLM }} | |
| - if: steps.cache-eclm-restore.outputs.cache-hit != 'true' | |
| name: Download eCLM ${{ env.VER_eCLM }} | |
| working-directory: ${{ env.MODEL_DIR }} | |
| run: | | |
| git clone -b $VER_eCLM https://github.com/HPSCTerrSys/eCLM.git | |
| echo "eCLM version: $(cd eCLM && git describe --tags --always)" | |
| - if: steps.cache-eclm-restore.outputs.cache-hit != 'true' | |
| name: Cache eCLM ${{ env.VER_eCLM }} | |
| uses: actions/cache/save@v4 | |
| with: | |
| path: ${{ env.MODEL_DIR }}/eCLM | |
| key: cache-${{ matrix.config.name }}-${{ env.VER_eCLM }} | |
| # | |
| # ParFlow | |
| # | |
| - name: Restore cached ParFlow ${{ env.VER_PARFLOW }} | |
| uses: actions/cache/restore@v4 | |
| id: cache-parflow-restore | |
| with: | |
| path: ${{ env.MODEL_DIR }}/parflow | |
| key: cache-${{ matrix.config.name }}-${{ env.VER_PARFLOW }} | |
| # TODO: Must use upstream repo https://github.com/parflow/parflow.git | |
| - if: steps.cache-parflow-restore.outputs.cache-hit != 'true' | |
| name: Download ParFlow ${{ env.VER_PARFLOW }} | |
| working-directory: ${{ env.MODEL_DIR }} | |
| run: | | |
| git clone https://github.com/parflow/parflow.git | |
| cd parflow | |
| git checkout $VER_PARFLOW | |
| echo "ParFlow version: $(git describe --tags --always)" | |
| - if: steps.cache-parflow-restore.outputs.cache-hit != 'true' | |
| name: Cache ParFlow ${{ env.VER_PARFLOW }} | |
| uses: actions/cache/save@v4 | |
| with: | |
| path: ${{ env.MODEL_DIR }}/parflow | |
| key: cache-${{ matrix.config.name }}-${{ env.VER_PARFLOW }} | |
| # | |
| # Hypre | |
| # | |
| - name: Restore cached Hypre ${{ env.VER_HYPRE }} | |
| uses: actions/cache/restore@v4 | |
| id: cache-hypre-restore | |
| with: | |
| path: ${{ env.CMAKE_PREFIX_PATH }} | |
| key: cache-${{ matrix.config.name }}-${{ env.VER_HYPRE }} | |
| - if: steps.cache-hypre-restore.outputs.cache-hit != 'true' | |
| name: Install Hypre ${{ env.VER_HYPRE }} | |
| run: | | |
| wget https://github.com/hypre-space/hypre/archive/v${VER_HYPRE}.tar.gz | |
| tar xf v${VER_HYPRE}.tar.gz | |
| cd hypre-${VER_HYPRE}/src | |
| ./configure --prefix=$(realpath $CMAKE_PREFIX_PATH) | |
| make -j4 install | |
| - if: steps.cache-hypre-restore.outputs.cache-hit != 'true' | |
| name: Cache Hypre ${{ env.VER_HYPRE }} | |
| uses: actions/cache/save@v4 | |
| with: | |
| path: ${{ env.CMAKE_PREFIX_PATH }} | |
| key: cache-${{ matrix.config.name }}-${{ env.VER_HYPRE }} | |
| # | |
| # TSMP2 | |
| # | |
| - name: Configure TSMP2 | |
| run: >- | |
| cmake -S . -B ${BUILD_DIR} | |
| -DCMAKE_BUILD_TYPE="RELEASE" | |
| -DCMAKE_INSTALL_PREFIX=${INSTALL_DIR} | |
| -DOASIS_SRC=${MODEL_DIR}/oasis3-mct | |
| -DeCLM="ON" | |
| -DeCLM_SRC=${MODEL_DIR}/eCLM | |
| -DParFlow="ON" | |
| -DPARFLOW_SRC=${MODEL_DIR}/parflow | |
| - name: Build TSMP2 | |
| run: | | |
| cmake --build ${BUILD_DIR} | |
| - name: Install TSMP2 | |
| run: | | |
| cmake --install ${BUILD_DIR} |