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README
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README
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QMEM
version: 0.1
Author: Txema Heredia Genestar
Email: [email protected]
Institution: Evolutionary Biology Institute (UPF-CSIC)
=========================================================
ABOUT QMEM:
Qmem is a script designed to describe the memory usage of a
SGE cluster. If your cluster has memory restrictions, the
usage of qstat solely is not enough to monitor its state
properly. Qmem attempts to solve that.
=========================================================
HOW TO USE IT:
In order to use qmem, your execution hosts must have
configured "PER HOST" the following COMPLEX ATTIBUTES:
h_vmem = set to the host total memory
num_jobs = set to the host num of processors
You can exchange "num_jobs" by "slots" here in the code
lines 75 and 76. We opted to use "num_jobs" instead of
"slots" because this allows us to submit jobs that override
it and request 0 " If you want to stick to "slots",simply
change it in lines 75 and 76.
Once you have configured both complex attributes in all
hosts, you are ready to run qmem.