Fix failures in dtypes test on cygwin (#5077) #4780
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| name: netCDF dev | |
| # Triggers the workflow on push or pull request or on demand | |
| on: | |
| workflow_dispatch: | |
| push: | |
| pull_request: | |
| branches: [ develop ] | |
| paths-ignore: | |
| - '.github/CODEOWNERS' | |
| - '.github/FUNDING.yml' | |
| - 'doc/**' | |
| - 'release_docs/**' | |
| - 'ACKNOWLEDGEMENTS' | |
| - 'LICENSE**' | |
| - '**.md' | |
| permissions: | |
| contents: read | |
| # Using concurrency to cancel any in-progress job or run | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.head_ref && github.ref || github.run_id }} | |
| cancel-in-progress: true | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Install System dependencies | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install ninja-build | |
| sudo apt install libssl3 libssl-dev libcurl4 | |
| sudo apt install -y libaec-dev zlib1g-dev automake autoconf libcurl4-openssl-dev libjpeg-dev wget curl bzip2 m4 flex bison cmake libzip-dev doxygen openssl libtool libtool-bin | |
| - name: Checkout HDF5 | |
| uses: actions/[email protected] | |
| - name: CMake Configure | |
| run: | | |
| mkdir "${{ runner.workspace }}/build" | |
| cd "${{ runner.workspace }}/build" | |
| cmake -C $GITHUB_WORKSPACE/config/cmake/cacheinit.cmake \ | |
| -G Ninja \ | |
| -DCMAKE_BUILD_TYPE=Release \ | |
| -DONLY_SHARED_LIBS:BOOL=ON \ | |
| -DHDF5_ENABLE_PARALLEL:BOOL=OFF \ | |
| -DHDF5_BUILD_CPP_LIB:BOOL=OFF \ | |
| -DHDF5_BUILD_FORTRAN:BOOL=OFF \ | |
| -DHDF5_BUILD_JAVA:BOOL=OFF \ | |
| -DHDF5_BUILD_DOC:BOOL=OFF \ | |
| -DLIBAEC_USE_LOCALCONTENT:BOOL=OFF \ | |
| -DZLIB_USE_LOCALCONTENT:BOOL=OFF \ | |
| -DH5_NO_DEPRECATED_SYMBOLS:BOOL=OFF \ | |
| -DBUILD_TESTING:BOOL=OFF \ | |
| -DCMAKE_INSTALL_PREFIX:PATH=/usr/local \ | |
| $GITHUB_WORKSPACE | |
| shell: bash | |
| - name: CMake Build | |
| run: cmake --build . --parallel 3 --config Release | |
| working-directory: ${{ runner.workspace }}/build | |
| - name: Install HDF5 | |
| run: | | |
| sudo cmake --install . --config Release --prefix="/usr/local" | |
| working-directory: ${{ runner.workspace }}/build | |
| - name: Checkout netCDF | |
| uses: actions/[email protected] | |
| with: | |
| repository: unidata/netcdf-c | |
| path: netcdf-c | |
| - name: Test netCDF | |
| run: | | |
| cd netcdf-c | |
| autoreconf -if | |
| # NOTE: --disable-byterange should be removed when the HTTP VFD has been updated | |
| CFLAGS=${CFLAGS} LDFLAGS=${LDFLAGS} LD_LIBRARY_PATH=${LD_LIBRARY_PATH} ./configure --enable-hdf5 --enable-dap --disable-dap-remote-tests --disable-byterange --enable-external-server-tests | |
| cat config.log | |
| cat libnetcdf.settings | |
| CFLAGS=${CFLAGS} LDFLAGS=${LDFLAGS} LD_LIBRARY_PATH=${LD_LIBRARY_PATH} make -j | |
| CFLAGS=${CFLAGS} LDFLAGS=${LDFLAGS} LD_LIBRARY_PATH=${LD_LIBRARY_PATH} make check TESTS="" -j | |
| LD_LIBRARY_PATH="/home/runner/work/hdf5/hdf5/netcdf-c/liblib/.libs:/usr/local/lib:${LD_LIBRARY_PATH}" | |
| CFLAGS=${CFLAGS} LDFLAGS=${LDFLAGS} LD_LIBRARY_PATH=${LD_LIBRARY_PATH} make check -j |