Fix pip install and add more exhaustive CI checks (#593)

.github/workflows/pip-checks.yml

@@ -0,0 +1,49 @@
+# This workflow checks that pip installation works to import the package (tests are in python-tests.yml)
+
+name: pip-install
+
+on:
+  push:
+    branches: [ main ]
+  pull_request:
+    branches: [ main ]
+
+jobs:
+  test:
+    name: ${{ matrix.os }}, python ${{ matrix.python-version }}
+    runs-on: ${{ matrix.os }}
+
+    strategy:
+      matrix:
+        os: ["ubuntu-latest", "macos-latest", "windows-latest"]
+        python-version: ["3.9", "3.10", "3.11"]
+
+    # Run all shells using bash (including Windows)
+    defaults:
+      run:
+        shell: bash -l {0}
+
+    steps:
+      - uses: actions/checkout@v4
+
+      # We initiate the environment empty
+      - name: Initiate empty environment
+        uses: conda-incubator/setup-miniconda@v3
+        with:
+          miniforge-variant: Mambaforge
+          miniforge-version: latest
+          auto-update-conda: true
+          use-mamba: true
+          channel-priority: strict
+          activate-environment: geoutils-pip
+          python-version:
+
+      # Use pip install
+      - name: Install project
+        run: |
+          mamba install pip
+          pip install -e .
+
+      # Check import works
+      - name: Check import works with base environment
+        run: python -c "import geoutils"

geoutils/vector.py

@@ -20,12 +20,12 @@
     overload,
 )
 
-import fiona
 import geopandas as gpd
 import matplotlib
 import matplotlib.pyplot as plt
 import numpy as np
 import pandas as pd
+import pyogrio
 import rasterio as rio
 import rasterio.errors
 import shapely
@@ -1137,7 +1137,7 @@ def reproject(
                 except rasterio.errors.RasterioIOError:
                     try:
                         ds_ref = Vector(ref)
-                    except fiona.errors.DriverError:
+                    except pyogrio.errors.DataSourceError:
                         raise ValueError("Could not open raster or vector with rasterio or fiona.")
             else:
                 raise TypeError("Type of ref must be string path to file, Raster or Vector.")

tests/test_misc.py

@@ -118,8 +118,8 @@ def useless_func() -> int:
 
     def test_diff_environment_yml(self, capsys) -> None:  # type: ignore
         # Test with synthetic environment
-        env = {"dependencies": ["python==3.9", "numpy", "fiona"]}
-        devenv = {"dependencies": ["python==3.9", "numpy", "fiona", "opencv"]}
+        env = {"dependencies": ["python==3.9", "numpy", "pandas"]}
+        devenv = {"dependencies": ["python==3.9", "numpy", "pandas", "opencv"]}
 
         # This should print the difference between the two
         geoutils.misc.diff_environment_yml(env, devenv, input_dict=True, print_dep="conda")
@@ -134,8 +134,8 @@ def test_diff_environment_yml(self, capsys) -> None:  # type: ignore
         captured = capsys.readouterr().out
         assert captured == "opencv\nNone\n"
 
-        env2 = {"dependencies": ["python==3.9", "numpy", "fiona"]}
-        devenv2 = {"dependencies": ["python==3.9", "numpy", "fiona", "opencv", {"pip": ["geoutils", "-e ./"]}]}
+        env2 = {"dependencies": ["python==3.9", "numpy", "pandas"]}
+        devenv2 = {"dependencies": ["python==3.9", "numpy", "pandas", "opencv", {"pip": ["geoutils", "-e ./"]}]}
 
         # The diff function should not account for -e ./ that is the local install for developers
         geoutils.misc.diff_environment_yml(env2, devenv2, input_dict=True, print_dep="both")
@@ -155,13 +155,13 @@ def test_diff_environment_yml(self, capsys) -> None:  # type: ignore
 
         # When the dependencies are not defined in dev-env but in env, it should raise an error
         # For normal dependencies
-        env3 = {"dependencies": ["python==3.9", "numpy", "fiona", "lol"]}
-        devenv3 = {"dependencies": ["python==3.9", "numpy", "fiona", "opencv", {"pip": ["geoutils"]}]}
+        env3 = {"dependencies": ["python==3.9", "numpy", "pandas", "lol"]}
+        devenv3 = {"dependencies": ["python==3.9", "numpy", "pandas", "opencv", {"pip": ["geoutils"]}]}
         with pytest.raises(ValueError, match="The following dependencies are listed in env but not dev-env: lol"):
             geoutils.misc.diff_environment_yml(env3, devenv3, input_dict=True, print_dep="pip")
 
         # For pip dependencies
-        env4 = {"dependencies": ["python==3.9", "numpy", "fiona", {"pip": ["lol"]}]}
-        devenv4 = {"dependencies": ["python==3.9", "numpy", "fiona", "opencv", {"pip": ["geoutils"]}]}
+        env4 = {"dependencies": ["python==3.9", "numpy", "pandas", {"pip": ["lol"]}]}
+        devenv4 = {"dependencies": ["python==3.9", "numpy", "pandas", "opencv", {"pip": ["geoutils"]}]}
         with pytest.raises(ValueError, match="The following pip dependencies are listed in env but not dev-env: lol"):
             geoutils.misc.diff_environment_yml(env4, devenv4, input_dict=True, print_dep="pip")