ci_tests_dev.yaml

# Test PyGMT with GMT dev version on Linux/macOS/Windows
#
# This workflow runs regular PyGMT tests with the GMT dev version, and also
# pre-release versions of several dependencies like NumPy, Pandas, Xarray, etc.
# If any tests fail, it also uploads the diff images as workflow artifacts.
# The GMT dev version is installed by fetching the latest source codes from
# the GMT master branch and compiling.
#
# It is triggered when a pull request is marked as "ready as review", or using
# the slash command `/test-gmt-dev`. It is also scheduled to run on Monday,
# Wednesday, and Friday on the main branch.
#
name: GMT Dev Tests

on:
  # push:
  #   branches: [ main ]
  pull_request:
    types: [ready_for_review]
    paths-ignore:
      - 'doc/**'
      - 'examples/**'
      - '*.md'
      - 'README.rst'
      - 'LICENSE.txt'
      - '.gitignore'
  repository_dispatch:
    types: [test-gmt-dev-command]
  # Schedule tests on Monday/Wednesday/Friday
  schedule:
    - cron: '0 0 * * 1,3,5'

concurrency:
  group: ${{ github.workflow }}-${{ github.ref }}
  cancel-in-progress: ${{ github.ref != 'refs/heads/main' }}

jobs:
  test_gmt_dev:
    name: ${{ matrix.os }} - GMT ${{ matrix.gmt_git_ref }}
    runs-on: ${{ matrix.os }}
    strategy:
      fail-fast: false
      matrix:
        os: [ubuntu-22.04, macos-13, windows-2022]
        gmt_git_ref: [master]
    timeout-minutes: 30
    defaults:
      run:
        shell: bash -l {0}

    steps:
      # Checkout current git repository
      - name: Checkout
        uses: actions/checkout@v4.1.1
        if: github.event_name != 'repository_dispatch'
        with:
          # fetch all history so that setuptools-scm works
          fetch-depth: 0

      # Generate token from GenericMappingTools bot
      - name: Generate token from GenericMappingTools bot
        uses: tibdex/github-app-token@v2
        if: github.event_name == 'repository_dispatch'
        id: generate-token
        with:
          app_id: ${{ secrets.APP_ID }}
          private_key: ${{ secrets.APP_PRIVATE_KEY }}

      # Checkout the pull request branch
      - name: Checkout
        uses: actions/checkout@v4.1.1
        if: github.event_name == 'repository_dispatch'
        with:
          token: ${{ steps.generate-token.outputs.token }}
          repository: ${{ github.event.client_payload.pull_request.head.repo.full_name }}
          ref: ${{ github.event.client_payload.pull_request.head.ref }}
          # fetch all history so that setuptools-scm works
          fetch-depth: 0

      - name: Show job URL
        uses: peter-evans/create-or-update-comment@v3.1.0
        if: github.event_name == 'repository_dispatch' && (matrix.os == 'ubuntu-latest')
        with:
          token: ${{ steps.generate-token.outputs.token }}
          repository: ${{ github.event.client_payload.github.payload.repository.full_name }}
          comment-id: ${{ github.event.client_payload.github.payload.comment.id }}
          body: https://github.com/${{ github.repository }}/actions/runs/${{ github.run_id }}

      # Install Micromamba with conda-forge dependencies
      - name: Setup Micromamba
        uses: mamba-org/setup-micromamba@v1.7.3
        with:
          environment-name: pygmt
          condarc: |
            channels:
              - conda-forge
              - nodefaults
          cache-downloads: true
          cache-environment: true
          create-args: >-
            python=3.12
            cmake
            make
            ninja
            curl
            fftw
            ghostscript=9.54.0
            glib
            hdf5
            libblas
            libcblas
            libgdal
            liblapack
            libnetcdf
            pcre
            zlib

      # Build and install latest GMT from GitHub
      - name: Install GMT ${{ matrix.gmt_git_ref }} branch (Linux/macOS)
        run: curl https://raw.githubusercontent.com/GenericMappingTools/gmt/master/ci/build-gmt.sh | bash
        env:
          GMT_GIT_REF: ${{ matrix.gmt_git_ref }}
          GMT_INSTALL_DIR: ${{ runner.temp }}/gmt-install-dir
        if: runner.os != 'Windows'

      - name: Install GMT ${{ matrix.gmt_git_ref }} branch (Windows)
        shell: cmd
        run: |
          git clone --depth=1 --single-branch --branch ${{ env.GMT_GIT_REF }} https://github.com/GenericMappingTools/gmt
          cd gmt/
          mkdir build
          cd build
          call "C:\Program Files\Microsoft Visual Studio\2022\Enterprise\VC\Auxiliary\Build\vcvars64.bat"
          cmake -G Ninja .. ^
            -DCMAKE_INSTALL_PREFIX=${{ env.GMT_INSTALL_DIR }} ^
            -DCMAKE_BUILD_TYPE=Release ^
            -DCMAKE_PREFIX_PATH=${{ env.MAMBA_ROOT_PREFIX }}\envs\pygmt\Library ^
            -DGMT_ENABLE_OPENMP=TRUE ^
            -DGMT_USE_THREADS=TRUE
          cmake --build .
          cmake --build . --target install
          cd ..
          rm -rf gmt/
        env:
          GMT_GIT_REF: ${{ matrix.gmt_git_ref }}
          GMT_INSTALL_DIR: ${{ runner.temp }}/gmt-install-dir
        if: runner.os == 'Windows'

      - name: Add GMT's bin to PATH
        run: echo '${{ runner.temp }}/gmt-install-dir/bin' >> $GITHUB_PATH

      # Install dependencies from PyPI
      - name: Install dependencies
        run: |
          python -m pip install --pre --prefer-binary \
                        --extra-index https://pypi.anaconda.org/scientific-python-nightly-wheels/simple \
                        numpy pandas xarray netCDF4 packaging \
                        build contextily dvc geopandas ipython pyarrow rioxarray \
                        'pytest>=6.0' pytest-cov pytest-doctestplus pytest-mpl \
                        sphinx-gallery

      # Show installed pkg information for postmortem diagnostic
      - name: List installed packages
        run: micromamba list

      # Pull baseline image data from dvc remote (DAGsHub)
      - name: Pull baseline image data from dvc remote
        run: dvc pull --verbose && ls -lhR pygmt/tests/baseline/

      # Download cached remote files (artifacts) from GitHub
      - name: Download remote data from GitHub
        uses: dawidd6/action-download-artifact@v3.0.0
        with:
          workflow: cache_data.yaml
          workflow_conclusion: success
          name: gmt-cache
          path: .gmt

      # Move downloaded files to ~/.gmt directory and list them
      - name: Move and list downloaded remote files
        run: |
          mkdir -p ~/.gmt
          mv .gmt/* ~/.gmt
          # Change modification times of the two files, so GMT won't refresh it
          touch ~/.gmt/server/gmt_data_server.txt ~/.gmt/server/gmt_hash_server.txt
          ls -lhR ~/.gmt

      # Install the package that we want to test
      - name: Install the package
        run: make install

      # Run the tests
      - name: Test with pytest
        run: make test PYTEST_EXTRA="-r P"
        env:
          GMT_LIBRARY_PATH: ${{ runner.temp }}/gmt-install-dir/lib

      # Upload diff images on test failure
      - name: Upload diff images if any test fails
        uses: actions/upload-artifact@v4
        if: ${{ failure() }}
        with:
          name: artifact-GMT-${{ matrix.gmt_git_ref }}-${{ runner.os }}
          path: tmp-test-dir-with-unique-name