diff --git a/src/main/java/fr/igred/omero/Annotatable.java b/src/main/java/fr/igred/omero/Annotatable.java index 5fa53076..b660e4ad 100644 --- a/src/main/java/fr/igred/omero/Annotatable.java +++ b/src/main/java/fr/igred/omero/Annotatable.java @@ -139,6 +139,7 @@ default void link(BasicDataManager dm, Annotation... annotations) * * @param client The client handling the connection. * @param annotations Annotations to add. + * @param The type of the client. * * @throws ServiceException Cannot connect to OMERO. * @throws AccessException Cannot access data. @@ -296,7 +297,7 @@ default List getValues(BasicBrowser browser, String key) * Returns all the ratings from the specified user IDs for this object. * * @param browser The data browser. - * @param userIds List of user IDs (can be null, i. e. all users). + * @param userIds List of user IDs (can be null, i.e. all users). * * @return See above. * @@ -331,6 +332,7 @@ default List getRatings(BasicBrowser browser) * * @param client The client handling the connection. * @param rating The rating. + * @param The type of the client. * * @throws ServiceException Cannot connect to OMERO. * @throws AccessException Cannot access data. @@ -400,6 +402,7 @@ default void addTable(BasicDataManager dm, TableWrapper table) * @param client The client handling the connection. * @param table Table to add to the object. * @param policy Whether older tables should be unlinked, deleted or deleted only if they become orphaned. + * @param The type of the client. * * @throws ServiceException Cannot connect to OMERO. * @throws AccessException Cannot access data. @@ -417,6 +420,7 @@ void addAndReplaceTable(C client, TableWrapper table, ReplacePolicy policy) * * @param client The client handling the connection. * @param table Table to add to the object. + * @param The type of the client. * * @throws ServiceException Cannot connect to OMERO. * @throws AccessException Cannot access data. @@ -501,6 +505,7 @@ default long addFile(BasicDataManager dm, File file) * @param client The client handling the connection. * @param file File to add. * @param policy Whether older files should be unlinked, deleted or deleted only if they become orphaned. + * @param The type of the client. * * @return ID of the file created in OMERO. * @@ -520,6 +525,7 @@ long addAndReplaceFile(C client, File file, ReplacePolicy policy) * * @param client The client handling the connection. * @param file File to add. + * @param The type of the client. * * @return ID of the file created in OMERO. * @@ -556,6 +562,7 @@ List getFileAnnotations(BasicBrowser browser) * @param client The client handling the connection. * @param annotation An annotation. * @param The type of the annotation. + * @param The type of the client. * * @throws ServiceException Cannot connect to OMERO. * @throws AccessException Cannot access data. @@ -573,6 +580,7 @@ void unlink(C client, A annotation) * @param client The client handling the connection. * @param annotations List of annotations * @param The type of the annotation. + * @param The type of the client. * * @throws ServiceException Cannot connect to OMERO. * @throws AccessException Cannot access data. @@ -623,6 +631,7 @@ List getAnnotations(BasicBrowser browser) * * @param client The client handling the connection. * @param object Other annotated object to copy annotations from. + * @param The type of the client. * * @throws ServiceException Cannot connect to OMERO. * @throws AccessException Cannot access data. diff --git a/src/main/java/fr/igred/omero/AnnotatableWrapper.java b/src/main/java/fr/igred/omero/AnnotatableWrapper.java index a143299f..1e392634 100644 --- a/src/main/java/fr/igred/omero/AnnotatableWrapper.java +++ b/src/main/java/fr/igred/omero/AnnotatableWrapper.java @@ -246,6 +246,7 @@ public List getRatings(BasicBrowser browser, List userId * * @param client The client handling the connection. * @param rating The rating. + * @param The type of the client. * * @throws ServiceException Cannot connect to OMERO. * @throws AccessException Cannot access data. @@ -305,6 +306,7 @@ public int getMyRating(BasicBrowser browser) * @param client The client handling the connection. * @param table Table to add to the object. * @param policy Whether older tables should be unlinked, deleted or deleted only if they become orphaned. + * @param The type of the client. * * @throws ServiceException Cannot connect to OMERO. * @throws AccessException Cannot access data. @@ -377,6 +379,7 @@ public TableWrapper getTable(BasicDataManager dm, Long fileId) * @param client The client handling the connection. * @param file File to add. * @param policy Whether older files should be unlinked, deleted or deleted only if they become orphaned. + * @param The type of the client. * * @return ID of the file created in OMERO. * @@ -495,6 +498,7 @@ void unlink(C client, Collection annotations) * @param client The client handling the connection. * @param linkType The link type. * @param childIds List of link child IDs. + * @param The type of the client. * * @throws ServiceException Cannot connect to OMERO. * @throws AccessException Cannot access data. @@ -523,6 +527,7 @@ protected void removeLinks(C client, * @param client The client handling the connection. * @param linkType The link type. * @param childId Link child ID. + * @param The type of the client. * * @throws ServiceException Cannot connect to OMERO. * @throws AccessException Cannot access data. diff --git a/src/main/java/fr/igred/omero/containers/Dataset.java b/src/main/java/fr/igred/omero/containers/Dataset.java index f569548d..9e94da2e 100644 --- a/src/main/java/fr/igred/omero/containers/Dataset.java +++ b/src/main/java/fr/igred/omero/containers/Dataset.java @@ -347,6 +347,7 @@ default void addImage(BasicDataManager dm, Image image) * * @param client The client handling the connection. * @param image Image to remove. + * @param The type of the client. * * @throws ServiceException Cannot connect to OMERO. * @throws AccessException Cannot access data. @@ -415,6 +416,7 @@ List importImage(ConnectionHandler conn, String path) * @param client The client handling the connection. * @param oldImages The list of old images to replace. * @param newImage The new image. + * @param The type of the client. * * @return The list of images that became orphaned once replaced. * @@ -460,6 +462,7 @@ List replaceImages(C client, * @param client The client handling the connection. * @param path Path to the image on the computer. * @param policy Whether older images should be unlinked, deleted or deleted only if they become orphaned. + * @param The type of the client. * * @return The list of IDs of the newly imported images. * @@ -480,6 +483,7 @@ List importAndReplaceImages(C client, String path, ReplacePolicy policy) * * @param client The client handling the connection. * @param path Path to the image on the computer. + * @param The type of the client. * * @return The list of IDs of the newly imported images. * diff --git a/src/main/java/fr/igred/omero/containers/DatasetWrapper.java b/src/main/java/fr/igred/omero/containers/DatasetWrapper.java index 7557494c..8aa479c8 100644 --- a/src/main/java/fr/igred/omero/containers/DatasetWrapper.java +++ b/src/main/java/fr/igred/omero/containers/DatasetWrapper.java @@ -171,6 +171,7 @@ public List getImages(BasicBrowser browser) * * @param client The client handling the connection. * @param image Image to remove. + * @param The type of the client. * * @throws ServiceException Cannot connect to OMERO. * @throws AccessException Cannot access data. @@ -231,6 +232,7 @@ public List importImage(ConnectionHandler conn, String path) * @param client The client handling the connection. * @param path Path to the image on the computer. * @param policy Whether older images should be unlinked, deleted or deleted only if they become orphaned. + * @param The type of the client. * * @return The list of IDs of the newly imported images. * diff --git a/src/main/java/fr/igred/omero/containers/Project.java b/src/main/java/fr/igred/omero/containers/Project.java index 03949e31..3652d3f1 100644 --- a/src/main/java/fr/igred/omero/containers/Project.java +++ b/src/main/java/fr/igred/omero/containers/Project.java @@ -147,6 +147,7 @@ default Dataset addDataset(BasicDataManager dm, Dataset dataset) * * @param client The client handling the connection. * @param dataset Dataset to remove. + * @param The type of the client. * * @throws ServiceException Cannot connect to OMERO. * @throws AccessException Cannot access data. diff --git a/src/main/java/fr/igred/omero/containers/ProjectWrapper.java b/src/main/java/fr/igred/omero/containers/ProjectWrapper.java index 1f6304d9..96aa3198 100644 --- a/src/main/java/fr/igred/omero/containers/ProjectWrapper.java +++ b/src/main/java/fr/igred/omero/containers/ProjectWrapper.java @@ -170,6 +170,7 @@ public Dataset addDataset(BasicDataManager dm, String name, String description) * * @param client The client handling the connection. * @param dataset Dataset to remove. + * @param The type of the client. * * @throws ServiceException Cannot connect to OMERO. * @throws AccessException Cannot access data. diff --git a/src/main/java/fr/igred/omero/core/Image.java b/src/main/java/fr/igred/omero/core/Image.java index 114fd17b..569d8196 100644 --- a/src/main/java/fr/igred/omero/core/Image.java +++ b/src/main/java/fr/igred/omero/core/Image.java @@ -446,6 +446,7 @@ default List getFolders(ContainersBrowser browser) * the ij library to use this function * * @param client The client handling the connection. + * @param The type of the client. * * @return ImagePlus generated from the current image. * @@ -469,6 +470,7 @@ ImagePlus toImagePlus(C client) * @param cBounds Array containing the C bounds from which the pixels should be retrieved. * @param zBounds Array containing the Z bounds from which the pixels should be retrieved. * @param tBounds Array containing the T bounds from which the pixels should be retrieved. + * @param The type of the client. * * @return an ImagePlus from the ij library. * @@ -491,6 +493,7 @@ ImagePlus toImagePlus(C client, * * @param client The client handling the connection. * @param roi The ROI. + * @param The type of the client. * * @return an ImagePlus from the ij library. * @@ -510,6 +513,7 @@ ImagePlus toImagePlus(C client, ROI roi) * * @param client The client handling the connection. * @param bounds The bounds. + * @param The type of the client. * * @return an ImagePlus from the ij library. * @@ -586,6 +590,7 @@ default Color getChannelImportedColor(BasicBrowser browser, int index) * * @param client The client handling the connection. * @param index Channel number. + * @param The type of the client. * * @return Color of the channel. * diff --git a/src/main/java/fr/igred/omero/core/ImageWrapper.java b/src/main/java/fr/igred/omero/core/ImageWrapper.java index 1b9f54e6..d1158059 100644 --- a/src/main/java/fr/igred/omero/core/ImageWrapper.java +++ b/src/main/java/fr/igred/omero/core/ImageWrapper.java @@ -386,6 +386,7 @@ public PixelsWrapper getPixels() { * @param cBounds Array containing the C bounds from which the pixels should be retrieved. * @param zBounds Array containing the Z bounds from which the pixels should be retrieved. * @param tBounds Array containing the T bounds from which the pixels should be retrieved. + * @param The type of the client. * * @return an ImagePlus from the ij library. *