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Run DeepCpG #8

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bdecato opened this issue Mar 28, 2017 · 0 comments
Open

Run DeepCpG #8

bdecato opened this issue Mar 28, 2017 · 0 comments
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enhancement

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@bdecato
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bdecato commented Mar 28, 2017

Description

As a biologist, I would like to run DeepCpG over single-cell DNA methylation data, in order to find imputed methylation states of unobserved CpG sites.

Estimate

5 hours.

Priority

SHOULD

Notes

  • DeepCpG is on GitHub. There is also a preprint manuscript.
  • It does both imputation of missing data and calling of differentially methylated regions; we may want to split this into two separate tools
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