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bds_atac.yml
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bds_atac.yml
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name: bds_atac
channels:
- anaconda
- asmeurer
- conda-forge
- intel
- bioconda
- defaults
dependencies:
- ca-certificates=2018.03.07=0
- glib=2.53.6=h5d9569c_2
- gsl=1.16=1
- r-base=3.2.2=0
- argh=0.26.1=py27_0
- bcftools=1.7=0
- bedtools=2.27.1=he941832_2
- bioconductor-biocgenerics=0.18.0=r3.2.2_0
- bioconductor-biocparallel=1.4.3=r3.2.2_0
- bioconductor-biostrings=2.38.4=0
- bioconductor-genomeinfodb=1.6.3=0
- bioconductor-genomicranges=1.22.4=0
- bioconductor-iranges=2.4.8=0
- bioconductor-rsamtools=1.22.0=r3.2.2_1
- bioconductor-s4vectors=0.8.11=0
- bioconductor-xvector=0.10.0=1
- bioconductor-zlibbioc=1.16.0=r3.2.2_1
- bowtie2=2.3.4.1=py27pl5.22.0_0
- bx-python=0.8.1=py27_0
- cutadapt=1.9.1=py27_0
- fastqc=0.11.5=1
- fisher=0.1.4=py27_0
- gffutils=0.9=py27_0
- ghostscript=9.18=1
- gnuplot=5.0.3=4
- htslib=1.7=0
- java-jdk=8.0.92=1
- macs2=2.1.1.20160309=r3.2.2_0
- metaseq=0.5.6=py27_0
- preseq=2.0.2=gsl1.16_0
- pybedtools=0.7.10=py27_2
- pyfaidx=0.5.3=py27_0
- pysam=0.14.1=py27_htslib1.7_0
- python-levenshtein=0.12.0=py27_1
- r-futile.logger=1.4.1=r3.2.2_0
- r-futile.options=1.0.0=r3.2.2_0
- r-lambda.r=1.1.7=r3.2.2_0
- r-snow=0.4_1=r3.2.2_0
- r-snowfall=1.84_6.1=r3.2.2_0
- r-spp=1.13=r3.2.2_0
- samtools=1.7=1
- trim-galore=0.4.1=pl5.22.0_0
- ucsc-bedclip=357=1
- ucsc-bedgraphtobigwig=357=1
- ucsc-bedtobigbed=357=1
- ucsc-bigwigaverageoverbed=357=1
- ucsc-bigwiginfo=357=1
- ucsc-fetchchromsizes=357=1
- ucsc-twobittofa=357=1
- ucsc-wigtobigwig=357=1
- dbus=1.11.0=0
- freetype=2.8.1=0
- gettext=0.19.8.1=0
- graphviz=2.38.0=7
- gst-plugins-base=1.8.0=0
- gstreamer=1.8.0=1
- libgd=2.2.5=3
- libwebp=0.5.2=7
- pango=1.40.14=0
- perl=5.22.0.1=0
- python-lzo=1.11=py27_0
- qt=5.6.2=7
- argcomplete=1.9.4=py27_0
- biopython=1.71=py27h637b7d7_0
- blas=1.0=openblas
- boost=1.65.1=py27_4
- curl=7.60.0=h84994c4_0
- expat=2.2.5=he0dffb1_0
- giflib=5.1.4=h26a3ec6_1
- graphite2=1.3.11=h16798f4_2
- harfbuzz=1.7.4=hc5b324e_0
- icu=58.2=h9c2bf20_1
- intel-openmp=2018.0.0=8
- kiwisolver=1.0.1=py27hc15e7b5_0
- libboost=1.65.1=habcd387_4
- libcurl=7.60.0=h1ad7b7a_0
- libedit=3.1.20170329=h6b74fdf_2
- libgcc=7.2.0=h69d50b8_2
- libgcc-ng=7.2.0=hdf63c60_3
- libgfortran=3.0.0=1
- libgfortran-ng=7.2.0=hdf63c60_3
- libiconv=1.15=h63c8f33_5
- libopenblas=0.2.20=h9ac9557_7
- libssh2=1.8.0=h9cfc8f7_4
- libstdcxx-ng=7.2.0=hdf63c60_3
- libtool=2.4.6=h544aabb_3
- libxcb=1.13=h1bed415_1
- lzo=2.10=h49e0be7_2
- mysql-connector-c=6.1.11=hf4847fb_0
- ncurses=6.1=hf484d3e_0
- nomkl=3.0=0
- numpy=1.13.3=py27_nomklh2b20989_4
- numpy-base=1.14.3=py27h2b20989_2
- openblas=0.2.20=7
- openblas-devel=0.2.20=7
- pcre=8.42=h439df22_0
- pigz=2.3=0
- py-boost=1.65.1=py27hf484d3e_4
- pyqt=5.6.0=py27_2
- python-dateutil=2.6.1=py27h4ca5741_1
- r=3.2.2=0
- r-bitops=1.0_6=r3.2.2_1a
- r-boot=1.3_17=r3.2.2_0a
- r-catools=1.17.1=r3.2.2_2a
- r-class=7.3_14=r3.2.2_0a
- r-cluster=2.0.3=r3.2.2_0a
- r-codetools=0.2_14=r3.2.2_0a
- r-foreign=0.8_66=r3.2.2_0a
- r-kernsmooth=2.23_15=r3.2.2_0a
- r-lattice=0.20_33=r3.2.2_0a
- r-mass=7.3_45=r3.2.2_0a
- r-matrix=1.2_2=r3.2.2_0a
- r-mgcv=1.8_9=r3.2.2_0a
- r-nlme=3.1_122=r3.2.2_0a
- r-nnet=7.3_11=r3.2.2_0a
- r-recommended=3.2.2=r3.2.2_0
- r-rpart=4.1_10=r3.2.2_0a
- r-spatial=7.3_11=r3.2.2_0a
- r-survival=2.38_3=r3.2.2_0a
- readline=7.0=ha6073c6_4
- scikit-learn=0.19.1=py27_nomklh6479e79_0
- scipy=1.1.0=py27_nomklh9d22d0a_0
- simplejson=3.15.0=py27h14c3975_0
- sip=4.19.8=py27hf484d3e_0
- subprocess32=3.5.1=py27h14c3975_0
- system=5.8=2
- backports=1.0=py27_intel_6
- backports.functools_lru_cache=1.5=py27_intel_1
- backports_abc=0.5=py27_intel_0
- bzip2=1.0.6=intel_14
- cairo=1.14.10=intel_0
- certifi=2018.1.18=py27_intel_0
- cycler=0.10.0=py27_intel_5
- cython=0.28.2=py27_intel_4
- fontconfig=2.12.5=intel_0
- functools32=3.2.3.2=py27_intel_5
- futures=3.2.0=py27_intel_0
- icc_rt=2018.0.3=intel_0
- intelpython=2018.0.3=0
- jinja2=2.9.6=py27_intel_0
- jpeg=9c=intel_0
- libffi=3.2.1=intel_8
- libpng=1.6.34=intel_1
- libtiff=4.0.9=intel_2
- libuuid=1.0.3=intel_2
- libxml2=2.9.5=intel_0
- markupsafe=1.0=py27_intel_0
- matplotlib=2.0.2=np113py27_intel_1
- mkl=2017.0.3=intel_6
- mkl_fft=1.0.0=np113py27_intel_15
- mkl_random=1.0.0=np113py27_intel_6
- nose=1.3.7=py27_intel_16
- openmp=2017.0.4=intel_0
- openssl=1.0.2o=intel_0
- pandas=0.19.2=py27_intel_4
- pip=9.0.1=py27_intel_0
- pixman=0.34.0=intel_0
- pycairo=1.13.3=py27_intel_0
- pyparsing=2.2.0=py27_intel_0
- python=2.7.14=intel_2
- pytz=2018.4=py27_intel_0
- pyyaml=3.12=py27_intel_3
- setuptools=27.2.0=py27_intel_0
- singledispatch=3.4.0.3=py27_intel_5
- six=1.10.0=py27_intel_8
- sqlite=3.20.1=intel_0
- ssl_match_hostname=3.5.0.1=py27_intel_5
- tbb=2018.0.1=py27_intel_4
- tcl=8.6.4=intel_19
- tk=8.6.4=intel_26
- tornado=4.5.2=py27_intel_0
- wheel=0.31.0=py27_intel_0
- xz=5.2.3=intel_0
- yaml=0.1.7=intel_0
- zlib=1.2.11=intel_3
- pip:
- backports.ssl-match-hostname==3.5.0.1
- configparser==3.5.0
- hmmlearn==0.2.0
- iced==0.4.2
- matplotlib-venn==0.11.5
- moods-python==1.9.3
- mpmath==1.0.0
- ngslib==1.1.20
- pyvcf==0.6.8
- pyx==0.12.1
prefix: /home/asd2007/intel/intelpython3/envs/bds_atac