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Make Problem #277

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qthinhlet opened this issue Jul 27, 2023 · 0 comments
Open

Make Problem #277

qthinhlet opened this issue Jul 27, 2023 · 0 comments

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@qthinhlet
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Hi, I'm currently trying to install the apbs-3.4.1 as the requirement for running g_mmpbsa. As far as I tried to install it, the "make" command resulted as:

$ make
[ 3%] Built target maloc
[ 32%] Built target superlu
[ 57%] Built target vf2c
[ 63%] Built target cgcode
[ 76%] Built target arpack
[ 77%] Built target punc
[ 80%] Built target gamer
[ 87%] Built target mc
[ 87%] Built target iapbs
[ 90%] Built target apbs_generic
[ 91%] Built target apbs_fem
[ 94%] Built target apbs_pmgc
[ 95%] Built target apbs_mg
[ 95%] Built target apbs_routines
[ 95%] Linking C executable apbs
/usr/bin/ld: /usr/lib/x86_64-linux-gnu/libcholmod.a(cholmod_metis.o): in function cholmod_metis_bisector': (.text+0x229): undefined reference to METIS_ComputeVertexSeparator'
/usr/bin/ld: /usr/lib/x86_64-linux-gnu/libcholmod.a(cholmod_metis.o): in function cholmod_metis': (.text+0x72b): undefined reference to METIS_NodeND'
collect2: error: ld returned 1 exit status
make[2]: *** [src/CMakeFiles/apbs.dir/build.make:147: src/apbs] Error 1
make[1]: *** [CMakeFiles/Makefile2:1914: src/CMakeFiles/apbs.dir/all] Error 2
make: *** [Makefile:166: all] Error 2

Previous commands have been done is:
cd apbs
mkdir build
cd build
cmake .. -DCMAKE_INSTALL_PREFIX=/usr/local/apbs -DENABLE_BEM=off -DENABLE_iAPBS=on

I'm installing it on the Ubuntu LTS 20.04 with Python 3.6.10 package.
Thanks for your advices.

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