diff --git a/apbs/doc/ChangeLog.md b/apbs/doc/ChangeLog.md index 3fbc111f0a..397c6a06d7 100644 --- a/apbs/doc/ChangeLog.md +++ b/apbs/doc/ChangeLog.md @@ -1,15 +1,22 @@ APBS 1.4.2 CHANGELOG ==================== -These are notes for APBS version 1.4.2. +These are notes for APBS version 1.4.2.1. --------------------------------------- * Binary releases may be found on [GitHub](https://github.com/Electrostatics/apbs-pdb2pqr/releases) and on [SourceForge](http://sourceforge.net/projects/apbs/files/apbs/). -###New Features -* Poisson-Boltzmann Semi-Analytical Method (PB-SAM) packaged and built with APBS +### Changes from 1.4.2 +* Actually included PB-AM binary, examples and documentation -- note that this is Linux and OS X only! +* Fixed Windows build so that it is not a Debug build, and ensured that no DLLs are missing + +### New Features +* Poisson-Boltzmann Semi-Analytical Method (PB-AM) packaged and built with APBS + * the binary is called `mpe` and colocated with the apbs binary + * documentation is with the APBS documentation, and called PBE_Manual_V1.docx + * examples are located with APBS examples in a pb-am directory * New Geometric flow API and improvements in speed (#235) * Support for BinaryDX file format (#216) * SOR solver added for mg-auto input file option @@ -21,8 +28,7 @@ These are notes for APBS version 1.4.2. * Intermetiate result testing (#64) * Example READMEs onverted to markdown and updated with latest results - -###Bug Fixes +### Bug Fixes * OpenMPI (mg-para) functionality restored (#190) * Fixed parsing PQR files that contained records other than _ATOM_ and _HETATM_ (#77, #214) * Geometric Flow boundary indexing bug fixed @@ -33,7 +39,7 @@ These are notes for APBS version 1.4.2. * Pull requests merged * Removed irrelevant warning messages (#378) -###Notes +### Notes The following packages are treated as submodules in APBS: * Geometric Flow has been moved to it's own [repository](https://github.com/Electrostatics/geoflow_c) * FETk has been [cloned](https://github.com/Electrostatics/FETK) so that we have could effect updates @@ -41,7 +47,7 @@ The following packages are treated as submodules in APBS: Added [chat feature](https://gitter.im/Electrostatics/help) for users. This can also be found from the support tab on http://www.poissonboltzmann.org/. -###Known Bugs +### Known Bugs * Travis CI Linux builds are breaking because Geometric Flow relies on C++11 and Travis boxen have an old GCC that doth not support C++11. This is also an issue for CentOS 5 * BEM is temprarily disabled due to build issues * Geometric Flow build is currently broken on Windows using Visual Studio diff --git a/apbs/doc/ReleaseNotes.md b/apbs/doc/ReleaseNotes.md index fa80c18c7d..99400d6a58 100644 --- a/apbs/doc/ReleaseNotes.md +++ b/apbs/doc/ReleaseNotes.md @@ -1,6 +1,6 @@ Dearest APBS users, -We are pleased to announce the latest release of APBS 1.4.2. The latest +We are pleased to announce the latest release of APBS 1.4.2.1. The latest version of APBS includes several notable features and bug fixes. This release includes a major rewrite of the geometric flow code for easier modification and testing. We are also packaging the code to run