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Evaluate and possibly implement standardised pipeline #324

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tcezard opened this issue Feb 19, 2018 · 0 comments
Open

Evaluate and possibly implement standardised pipeline #324

tcezard opened this issue Feb 19, 2018 · 0 comments

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@tcezard
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tcezard commented Feb 19, 2018

see:
https://github.com/CCDG/Pipeline-Standardization/blob/4d614859df2f559c25d86c746e23787422252102/PipelineStandard.md

They provide specific on how to implement GATK best practice pipeline and it should be realively easy to use them to implement a new variant detection pipeline for human.
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