diff --git a/subworkflows/local/extract_darwin/main.nf b/subworkflows/local/extract_darwin/main.nf index b52cdb5..28caa86 100644 --- a/subworkflows/local/extract_darwin/main.nf +++ b/subworkflows/local/extract_darwin/main.nf @@ -7,8 +7,7 @@ workflow EXTRACT_DARWIN { take: genomes_folder matrix_file - hog_orthoxml - + main: def summaries = genomes_folder / "Summaries.drw" def taxonomy = genomes_folder / "taxonomy.sqlite" diff --git a/subworkflows/local/xrefs/prepare/main.nf b/subworkflows/local/xrefs/prepare/main.nf index 2b90d0b..228ad1a 100644 --- a/subworkflows/local/xrefs/prepare/main.nf +++ b/subworkflows/local/xrefs/prepare/main.nf @@ -41,6 +41,6 @@ workflow PREPARE_XREFS { emit: taxmap = RELEVANT_TAXID_MAP.out.tax_map - xref = filtered_xrefs + xref_chunks = filtered_xrefs } \ No newline at end of file