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Hello, I am trying setup your demos, and test run of them and having several errors on code :
python demos/unpaired_ct_lung/demo_train.py
The training can also be launched using the following command.
deepreg_train --gpu '0' --config_path demos/unpaired_ct_lung/unpaired_ct_lung.yaml --log_dir demos/unpaired_ct_lung --exp_name logs_train
=======================================================
Traceback (most recent call last):
File "demos/unpaired_ct_lung/demo_train.py", line 46, in <module>
train(
TypeError: train() got an unexpected keyword argument 'exp_name'
Traceback (most recent call last):
File "/usr/local/bin/deepreg_train", line 8, in <module>
sys.exit(main())
File "/usr/local/lib/python3.8/dist-packages/deepreg/train.py", line 242, in main
train(
File "/usr/local/lib/python3.8/dist-packages/deepreg/train.py", line 89, in train
config, log_dir, ckpt_path = build_config(
File "/usr/local/lib/python3.8/dist-packages/deepreg/train.py", line 44, in build_config
config = config_parser.load_configs(config_path)
File "/usr/local/lib/python3.8/dist-packages/deepreg/config/parser.py", line 45, in load_configs
loaded_config = config_sanity_check(config)
File "/usr/local/lib/python3.8/dist-packages/deepreg/config/parser.py", line 87, in config_sanity_check
if data_config["format"] not in ["nifti", "h5"]:
the config is default
dataset:
train:
dir: demos/unpaired_ct_lung/dataset/train
format: nifti
labeled: true
valid:
dir: demos/unpaired_ct_lung/dataset/test
format: nifti
labeled: true
test:
dir: demos/unpaired_ct_lung/dataset/test
format: nifti
labeled: true
type: unpaired # paired / unpaired / grouped
image_shape: [96, 96, 104]
train:
method: "ddf" # the registration method, value should be ddf / dvf / conditional
backbone:
name: "local" # value should be local / global / unet
num_channel_initial: 32 # number of initial channel in local net, controls the size of the network
extract_levels: [0, 1, 2, 3]
loss:
image:
name: "ssd"
weight: 2.0
label:
weight: 1.0
name: "dice"
scales: [0, 1, 2, 4, 8, 16]
regularization:
weight: 1.0
name: "bending"
preprocess:
data_augmentation:
name: "affine"
batch_size: 4
shuffle_buffer_num_batch: 1
optimizer:
name: "Adam"
learning_rate: 1.0e-5
epochs: 5000
save_period: 500
my installed version is latest 0.1.2
Maybe it is worth to check.
Thank you
The text was updated successfully, but these errors were encountered:
Hello, I am trying setup your demos, and test run of them and having several errors on code :
further when I try this command
when I removed --exp_name and do same run
the config is default
my installed version is latest 0.1.2
Maybe it is worth to check.
Thank you
The text was updated successfully, but these errors were encountered: