From b85e23d70d646c78b04feb3d4961bd5a377151b0 Mon Sep 17 00:00:00 2001 From: Caleb Schilly Date: Tue, 29 Oct 2024 14:29:34 -0400 Subject: [PATCH] #126: add support for rank-level user_defined QOI --- data/reader_test_data/reader_test_data.json | 6 +++++ data/synthetic_attributes/data.0.json | 2 +- data/synthetic_attributes/data.1.json | 2 +- data/synthetic_attributes/data.2.json | 2 +- data/synthetic_attributes/data.3.json | 2 +- .../data.0.json.br | Bin 5375 -> 5599 bytes .../data.1.json.br | Bin 5235 -> 5456 bytes .../data.2.json.br | Bin 5300 -> 5569 bytes .../data.3.json.br | Bin 5260 -> 5485 bytes scripts/create_synthetic_attributes_data.py | 22 ++++++++++----- src/vt-tv/api/info.h | 14 ++++++---- src/vt-tv/api/rank.h | 11 ++++++++ src/vt-tv/utility/json_reader.cc | 19 ++++++++----- tests/unit/api/test_info.cc | 8 +++--- tests/unit/utility/test_json_reader.cc | 25 ++++++++++++++++++ 15 files changed, 87 insertions(+), 26 deletions(-) diff --git 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zFs|O}I$mC!o8P|2^~qsAoHrxX0ax z=74vE46P^v#FR6cy9iuq*H;@{kA3(GVJBxeJ+)Z8l8``e`oz?dk%Ys_IWK>R;K%_< zcq!qV34%_{3?bn+M0$g~blkC`m*(@3FSXk^AFzDf_u5)JH+nRPCpRg?z7^e*pYWs^ zFLhd*Z_Uw9uN1q zvCLWA0JyV!l&!>2q4$y{xl4OX0Cl@Gfa$B7t<{h+li>^6*xFA z-L?f)T3yd}u+J~_p z9=8S{1phyj0$pZo6g%%#@6rxMm5|Sukdk^NpSt$MlB03?`^|q|=ZZUbI}-WE0X1o1 zbw+n`SrzVuLqtl(dlFh@zx}~_SLo@^omn&A+ZCQ5b#5fR3$p_Dy{de1?42M1+E#w7 zcYQ0=gm+&KTkWFpC^TqnEJbMQ%Xs8uQW8;VwAp7#pLJ)CSBzd>tlmVvv=L#z?{CUCLv#Mf~# zx$VnEv6GzBr`v~E4KvrgAby0#o;o#ve4S^mK$8=f+det_55t$Zb0Q)lCbwDhJkzAH zMn=`&Tke;h_GYwsX10Ey>6kWH;B{4x>*?T4HOyl|@f)0|{SKgJ@CrR4J!mX9d%4Q& z-}9TzO5+f5+;sSD|J|J++uKm`c|0ErBq|2?xN1F$SR?M>xuOZ*b?EPJxzDpHD7>x$ z!eH= 0) { return rank_attributes.at(rank_qoi); } else { + auto rank_user_defined = rank.getUserDefined(); + if (rank_user_defined.count(rank_qoi) > 0) { + return rank_user_defined.at(rank_qoi); + } throw std::runtime_error("Invalid Rank QOI: " + rank_qoi); } } diff --git a/src/vt-tv/api/rank.h b/src/vt-tv/api/rank.h index e7a77918e3..680e32ee92 100644 --- a/src/vt-tv/api/rank.h +++ b/src/vt-tv/api/rank.h @@ -65,9 +65,11 @@ struct Rank { Rank( NodeType in_rank, std::unordered_map in_phase_info, + std::unordered_map in_user_defined = {}, std::unordered_map in_attributes = {}) : rank_(in_rank), phase_info_(std::move(in_phase_info)), + user_defined_(std::move(in_user_defined)), attributes_(std::move(in_attributes)) { } /** @@ -100,6 +102,13 @@ struct Rank { return phase_info_.at(phase).getLoad(); } + /** + * \brief Get user_defined fields + * + * \return user_defined fields + */ + auto const& getUserDefined() const { return user_defined_; } + /** * \brief Get attribute fields * @@ -151,6 +160,7 @@ struct Rank { void serialize(SerializerT& s) { s | rank_; s | phase_info_; + s | user_defined_; s | attributes_; } @@ -160,6 +170,7 @@ struct Rank { /// Work for each phase std::unordered_map phase_info_; /// QOIs to be visualized + std::unordered_map user_defined_; std::unordered_map attributes_; }; diff --git a/src/vt-tv/utility/json_reader.cc b/src/vt-tv/utility/json_reader.cc index ca9b6a24ff..9bac87ee78 100644 --- a/src/vt-tv/utility/json_reader.cc +++ b/src/vt-tv/utility/json_reader.cc @@ -234,10 +234,6 @@ std::unique_ptr JSONReader::parse() { ElementIDType to_id = to.value("id", to["seq_id"]); assert(bytes.is_number() && "bytes must be a number"); - // assert(from.is_number()); - // assert(to.is_number()); - - // fmt::print(" From: {}, to: {}\n", from_id, to_id); // Object on this rank sent data auto from_it = objects.find(from_id); @@ -262,20 +258,29 @@ std::unique_ptr JSONReader::parse() { } } - std::unordered_map readed_metadata; + std::unordered_map readed_attributes; + std::unordered_map readed_user_defined; if (j.find("metadata") != j.end()) { auto metadata = j["metadata"]; if (metadata.find("attributes") != metadata.end()) { auto attributes = metadata["attributes"]; if (attributes.is_object()) { for (auto& [key, value] : attributes.items()) { - readed_metadata[key] = value; + readed_attributes[key] = value; + } + } + } + if (metadata.find("user_defined") != metadata.end()) { + auto user_defined = metadata["user_defined"]; + if (user_defined.is_object()) { + for (auto& [key, value] : user_defined.items()) { + readed_user_defined[key] = value; } } } } - Rank r{rank_, std::move(phase_info), std::move(readed_metadata)}; + Rank r{rank_, std::move(phase_info), std::move(readed_user_defined), std::move(readed_attributes)}; std::unordered_map rank_info; rank_info.try_emplace(rank_, std::move(r)); diff --git a/tests/unit/api/test_info.cc b/tests/unit/api/test_info.cc index 494aa69556..be8fd32386 100644 --- a/tests/unit/api/test_info.cc +++ b/tests/unit/api/test_info.cc @@ -476,13 +476,13 @@ TEST_F(InfoTest, test_get_rank_qoi) { } } - ASSERT_EQ(std::get(info.getRankAttribute(rank_0, "attr1")), 12.0); - ASSERT_EQ(std::get(info.getRankAttribute(rank_1, "attr1")), 13.0); + ASSERT_EQ(std::get(info.getRankAttributeOrUserDefined(rank_0, "attr1")), 12.0); + ASSERT_EQ(std::get(info.getRankAttributeOrUserDefined(rank_1, "attr1")), 13.0); ASSERT_EQ( - std::get(info.getRankAttribute(rank_0, "attr2")), "ab"); + std::get(info.getRankAttributeOrUserDefined(rank_0, "attr2")), "ab"); ASSERT_EQ( - std::get(info.getRankAttribute(rank_1, "attr2")), "cd"); + std::get(info.getRankAttributeOrUserDefined(rank_1, "attr2")), "cd"); // Test getRankQOIAtPhase method ASSERT_EQ(info.getRankQOIAtPhase(0, 0, "sent_volume"), 2.0); diff --git a/tests/unit/utility/test_json_reader.cc b/tests/unit/utility/test_json_reader.cc index d33dd2828d..37f71ea4f6 100644 --- a/tests/unit/utility/test_json_reader.cc +++ b/tests/unit/utility/test_json_reader.cc @@ -147,6 +147,31 @@ TEST_F(JSONReaderTest, test_json_reader_metadata_attributes) { EXPECT_EQ("abc", std::get(rank_attributes.at("stringSample"))); } + +TEST_F(JSONReaderTest, test_json_reader_rank_user_defined) { + std::filesystem::path p = + std::filesystem::path(SRC_DIR) / "data/lb_test_data"; + std::string path = std::filesystem::absolute(p).string(); + + NodeType rank = 0; + JSONReader reader{rank}; + + reader.readFile(path + "/reader_test_data.json"); + auto info = reader.parse(); + auto& rank_info = info->getRank(rank); + EXPECT_EQ(rank_info.getRankID(), rank); + + auto& rank_user_defined = rank_info.getUserDefined(); + EXPECT_TRUE(rank_user_defined.find("intSample") != rank_user_defined.end()); + EXPECT_EQ(1, std::get(rank_user_defined.at("intSample"))); + + EXPECT_TRUE(rank_user_defined.find("doubleSample") != rank_user_defined.end()); + EXPECT_EQ(2.213, std::get(rank_user_defined.at("doubleSample"))); + + EXPECT_TRUE(rank_user_defined.find("stringSample") != rank_user_defined.end()); + EXPECT_EQ("abc", std::get(rank_user_defined.at("stringSample"))); +} + TEST_F(JSONReaderTest, test_json_reader_object_info_attributes) { std::filesystem::path p = std::filesystem::path(SRC_DIR) / "data/reader_test_data";