diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index 38ae72f..f7c68dc 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -37,9 +37,9 @@ repos: files: ^(.*/)?(poetry\.lock|pyproject\.toml)$ - id: poetry-export name: poetry-export - description: run poetry export to sync lock file with requirements.txt + description: run poetry export to sync lock file with requirements-dev.txt entry: poetry export language: python pass_filenames: false files: ^(.*/)?poetry\.lock$ - args: ["--dev", "-f", "requirements.txt", "-o", "requirements-dev.txt"] + args: ["-f", "requirements.txt", "-o", "requirements.txt"] \ No newline at end of file diff --git a/README.md b/README.md index 9f1e238..57ec651 100644 --- a/README.md +++ b/README.md @@ -32,10 +32,10 @@ from astropy.time import Time import zodipy -# Initialize a zodiacal light model at a wavelength/frequency or at a bandpass +# Initialize a zodiacal light model at a wavelength/frequency or over a bandpass model = zodipy.Model(25*u.micron, name="DIRBE") -# ZodiPy uses astropy's `SkyCoord` for coordinate inputs +# Use Astropy's `SkyCoord` to specify coordinate lon = [10, 10.1, 10.2] * u.deg lat = [90, 89, 88] * u.deg skycoord = SkyCoord( @@ -44,7 +44,8 @@ skycoord = SkyCoord( obstime=Time("2022-01-01 12:00:00"), frame="galactic", ) -# The zodiacal light model is evaluated + +# Compute the zodiacal light as seen from Earth emission = model.evaluate(skycoord, obspos="earth") print(emission) @@ -58,7 +59,10 @@ See [CITATION](https://github.com/Cosmoglobe/zodipy/blob/main/CITATION.bib) ## Install -ZodiPy is installed using `pip install zodipy`. +ZodiPy is installed with pip +```bash +pip install zodipy +``` ## Dependencies ZodiPy supports all Python versions >= 3.9, and has the following dependencies: @@ -84,25 +88,18 @@ Contributing developers will need to download the following additional dependenc - mkdocs-material - mkdocstrings - mkdocstrings-python -- markdown (<3.4.0) +- markdown which are required to test and build ZodiPy. ### Poetry -Developers can install ZodiPy through [Poetry](https://python-poetry.org/) (Poetry >= 1.8.0) by first cloning or forking the repository, and then running -``` -poetry install -``` -in a virtual environment from the repository root. This will read the `pyproject.toml` file in the repository and install all dependencies. +ZodiPy uses [Poetry](https://python-poetry.org/) for package managing. To build and commit to the repository with the existing pre-commit setup, developers need to have Poetry (>= 1.8.0) installed. See the Poetry [documentation](https://python-poetry.org/docs/) for installation guide. -### pip -Developers not using Poetry can install ZodiPy in a virtual environment with all dependencies by first cloning or forking the repository and then running +After poetry has been installed, developers should create a new virtual environment and run the following in the root of the ZodiPy repositry ``` -pip install -r requirements-dev.txt +poetry install ``` -from the repositry root. This will read and download all the dependencies from the `requirements-dev.txt` file in the repository. - -Note that developers using Python 3.12 will need to upgrade their pip versions with `python3 -m pip install --upgrade pip` before being able to install ZodiPy. This is due to known incompatibilities between older pip versions and Python 3.12 +This will read and download all dependencies from `pyproject.toml`, and `poetry.lock`. ### Tests, linting and formatting, and building documentation The following tools should be run from the root of the repository with no errors. (These are ran automatically as part of the CI workflows on GitHub, but should be tested locally first) diff --git a/docs/index.md b/docs/index.md index aff20f9..d43efae 100644 --- a/docs/index.md +++ b/docs/index.md @@ -17,7 +17,6 @@ ZodiPy is an [Astropy-affiliated](https://www.astropy.org/affiliated/) package for simulating zodiacal light in intensity for arbitrary Solar system observers. ![ZodiPy Logo](img/zodipy_map.png) - ## A simple example ```python import astropy.units as u @@ -26,10 +25,10 @@ from astropy.time import Time import zodipy -# Initialize a zodiacal light model at a wavelength/frequency or at a bandpass +# Initialize a zodiacal light model at a wavelength/frequency or over a bandpass model = zodipy.Model(25*u.micron, name="DIRBE") -# ZodiPy uses astropy's `SkyCoord` for coordinate inputs +# Use Astropy's `SkyCoord` to specify coordinate lon = [10, 10.1, 10.2] * u.deg lat = [90, 89, 88] * u.deg skycoord = SkyCoord( @@ -38,7 +37,8 @@ skycoord = SkyCoord( obstime=Time("2022-01-01 12:00:00"), frame="galactic", ) -# The zodiacal light model is evaluated + +# Compute the zodiacal light as seen from Earth emission = model.evaluate(skycoord, obspos="earth") print(emission) diff --git a/docs/usage.md b/docs/usage.md index 6b7f076..4b21d75 100644 --- a/docs/usage.md +++ b/docs/usage.md @@ -185,7 +185,7 @@ In the following, we simulate a scan across the Ecliptic plane {!examples/ecliptic_scan.py!} ``` -![Ecliptic scan profile](img/timestream.png) +![Ecliptic scan profile](img/ecliptic_scan.png) ### HEALPIx maps diff --git a/mkdocs.yml b/mkdocs.yml index d9b7c4c..ddcc55d 100644 --- a/mkdocs.yml +++ b/mkdocs.yml @@ -28,6 +28,8 @@ theme: - content.code.copy - content.code.select - navigation.tabs + - navigation.instant + - navigation.top markdown_extensions: - markdown_include.include: base_path: docs @@ -67,9 +69,4 @@ plugins: docstring_section_style: spacy signature_crossrefs: true show_symbol_type_heading: true - show_symbol_type_toc: true -# - mkdocstrings: -# default_handler: python -# handlers: -# options: -# merge_init_into_class: true \ No newline at end of file + show_symbol_type_toc: true \ No newline at end of file diff --git a/poetry.lock b/poetry.lock index 41d0d95..c943ea5 100644 --- a/poetry.lock +++ b/poetry.lock @@ -588,13 +588,13 @@ test = ["pytest", "pytest-cython", "pytest-doctestplus", "requests"] [[package]] name = "hypothesis" -version = "6.100.4" +version = "6.100.5" description = "A library for property-based testing" optional = false python-versions = ">=3.8" files = [ - {file = "hypothesis-6.100.4-py3-none-any.whl", hash = "sha256:f1909d4702d21be55720bbbc58e0b42172e14bf712a8ecbab00ad6ae209a5ec9"}, - {file = "hypothesis-6.100.4.tar.gz", hash = "sha256:f6858353a5fae943cae149cc618b9f2b261143df9d8d792cf1065a1b289bbb24"}, + {file = "hypothesis-6.100.5-py3-none-any.whl", hash = "sha256:d2f875a8791abdf68599e85cc9238f7239a73b72362d34be95e532e811766723"}, + {file = "hypothesis-6.100.5.tar.gz", hash = "sha256:14e06081459ee96ca8f1ed996b6fc19f71910281e01f6a9fa3d9d6e68bbe4a25"}, ] [package.dependencies] @@ -1134,18 +1134,18 @@ python-legacy = ["mkdocstrings-python-legacy (>=0.2.1)"] [[package]] name = "mkdocstrings-python" -version = "1.8.0" +version = "1.10.0" description = "A Python handler for mkdocstrings." optional = false python-versions = ">=3.8" files = [ - {file = "mkdocstrings_python-1.8.0-py3-none-any.whl", hash = "sha256:4209970cc90bec194568682a535848a8d8489516c6ed4adbe58bbc67b699ca9d"}, - {file = "mkdocstrings_python-1.8.0.tar.gz", hash = "sha256:1488bddf50ee42c07d9a488dddc197f8e8999c2899687043ec5dd1643d057192"}, + {file = "mkdocstrings_python-1.10.0-py3-none-any.whl", hash = "sha256:ba833fbd9d178a4b9d5cb2553a4df06e51dc1f51e41559a4d2398c16a6f69ecc"}, + {file = "mkdocstrings_python-1.10.0.tar.gz", hash = "sha256:71678fac657d4d2bb301eed4e4d2d91499c095fd1f8a90fa76422a87a5693828"}, ] [package.dependencies] -griffe = ">=0.37" -mkdocstrings = ">=0.20" +griffe = ">=0.44" +mkdocstrings = ">=0.24.2" [[package]] name = "mypy" diff --git a/pyproject.toml b/pyproject.toml index f77cc3c..47b2226 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,6 +1,6 @@ [tool.poetry] name = "zodipy" -version = "0.9.2" +version = "1.0.0" description = "A Python package for zodiacal light simulations" authors = ["Metin San "] readme = "README.md" @@ -102,6 +102,7 @@ lint.select = [ "PLW", "TRY", "RUF", + "NPY201" ] line-length = 100 lint.ignore = [ diff --git a/requirements-dev.txt b/requirements-dev.txt deleted file mode 100644 index e3dd267..0000000 --- a/requirements-dev.txt +++ /dev/null @@ -1,1069 +0,0 @@ -astropy==5.2.2 ; python_version >= "3.8" \ - 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