This release contains a bugfix required to use the subsetting options such as --targetGenomes and --ignoreGenomes without crashing.
This release uses Cactus's Pinch Graph library to create the sequence graph.
Notable Changes:
- Bespoke STL-based structures and algorimths replaced with Pinch Graph library
- SNPS are aligned through using the column iterator instead of tables
- Much more performant than original implementaiton, but still only tested on smallish graphs