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using Oceananigans using Oceananigans.Units using Oceananigans.TurbulenceClosures: CATKEVerticalDiffusivity grid = RectilinearGrid(size=128, z=(-128, 0), topology=(Flat, Flat, Bounded)) closure = (VerticalScalarDiffusivity(VerticallyImplicitTimeDiscretization(), κ=1e-4), CATKEVerticalDiffusivity()) model = HydrostaticFreeSurfaceModel(; grid, closure, tracers = (:b, :e), buoyancy = BuoyancyTracer()) bᵢ(z) = 1e-5 * z set!(model, b = bᵢ) simulation = Simulation(model, Δt=1minute, stop_iteration=10) run!(simulation)
generates the error
julia> include("tupled_vertical_diffusion.jl") [ Info: Initializing simulation... [ Info: ... simulation initialization complete (2.367 seconds) [ Info: Executing initial time step... ERROR: LoadError: type Tuple has no field κe Stacktrace: [1] getproperty @ ./Base.jl:37 [inlined] [2] time_step_catke_equation!(model::HydrostaticFreeSurfaceModel{…}) @ Oceananigans.TurbulenceClosures.TKEBasedVerticalDiffusivities ~/Projects/Oceananigans.jl/src/TurbulenceClosures/turbulence_closure_implementations/TKEBasedVerticalDiffusivities/time_step_catke_equation.jl:25 [3] compute_diffusivities!(diffusivities::@NamedTuple{…}, closure::CATKEVerticalDiffusivity{…}, model::HydrostaticFreeSurfaceModel{…}; parameters::Symbol) @ Oceananigans.TurbulenceClosures.TKEBasedVerticalDiffusivities ~/Projects/Oceananigans.jl/src/TurbulenceClosures/turbulence_closure_implementations/TKEBasedVerticalDiffusivities/catke_vertical_diffusivity.jl:197 [4] compute_diffusivities! @ ~/Projects/Oceananigans.jl/src/TurbulenceClosures/turbulence_closure_implementations/TKEBasedVerticalDiffusivities/catke_vertical_diffusivity.jl:181 [inlined] [5] #compute_diffusivities!#24 @ ~/Projects/Oceananigans.jl/src/TurbulenceClosures/closure_tuples.jl:79 [inlined] [6] compute_diffusivities! @ ~/Projects/Oceananigans.jl/src/TurbulenceClosures/closure_tuples.jl:76 [inlined] [7] update_state!(model::HydrostaticFreeSurfaceModel{…}, grid::RectilinearGrid{…}, callbacks::Tuple{}; compute_tendencies::Bool) @ Oceananigans.Models.HydrostaticFreeSurfaceModels ~/Projects/Oceananigans.jl/src/Models/HydrostaticFreeSurfaceModels/single_column_model_mode.jl:72 [8] update_state! @ ~/Projects/Oceananigans.jl/src/Models/HydrostaticFreeSurfaceModels/single_column_model_mode.jl:64 [inlined] [9] update_state! @ ~/Projects/Oceananigans.jl/src/Models/HydrostaticFreeSurfaceModels/update_hydrostatic_free_surface_model_state.jl:29 [inlined] [10] time_step!(model::HydrostaticFreeSurfaceModel{…}, Δt::Float64; callbacks::Tuple{}, euler::Bool) @ Oceananigans.TimeSteppers ~/Projects/Oceananigans.jl/src/TimeSteppers/quasi_adams_bashforth_2.jl:123 [11] time_step!(sim::Simulation{HydrostaticFreeSurfaceModel{…}, Float64, Float64, OrderedCollections.OrderedDict{…}, OrderedCollections.OrderedDict{…}, OrderedCollections.OrderedDict{…}}) @ Oceananigans.Simulations ~/Projects/Oceananigans.jl/src/Simulations/run.jl:122 [12] run!(sim::Simulation{HydrostaticFreeSurfaceModel{…}, Float64, Float64, OrderedCollections.OrderedDict{…}, OrderedCollections.OrderedDict{…}, OrderedCollections.OrderedDict{…}}; pickup::Bool) @ Oceananigans.Simulations ~/Projects/Oceananigans.jl/src/Simulations/run.jl:97 [13] run!(sim::Simulation{HydrostaticFreeSurfaceModel{…}, Float64, Float64, OrderedCollections.OrderedDict{…}, OrderedCollections.OrderedDict{…}, OrderedCollections.OrderedDict{…}}) @ Oceananigans.Simulations ~/Projects/Oceananigans.jl/src/Simulations/run.jl:85 [14] top-level scope @ ~/Projects/Oceananigans.jl/validation/vertical_mixing_closures/tupled_vertical_diffusion.jl:20 [15] include(fname::String) @ Base.MainInclude ./client.jl:489 [16] top-level scope @ REPL[1]:1 in expression starting at /Users/gregorywagner/Projects/Oceananigans.jl/validation/vertical_mixing_closures/tupled_vertical_diffusion.jl:20 Some type information was truncated. Use `show(err)` to see complete types.
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generates the error
The text was updated successfully, but these errors were encountered: