pipeline.yml

env:
  JULIA_VERSION: "1.6.2"
  JULIA_MINOR_VERSION: "1.6"
  OPENBLAS_NUM_THREADS: 1
  GKSwstype: nul

steps:
  - label: "init project env"
    key: "init_project_env"
    command:
      - "echo $$JULIA_DEPOT_PATH"
      - "julia --project -e 'using Pkg; Pkg.instantiate(;verbose=true)'"
      - "julia --project -e 'using Conda; Conda.add(\"scikit-learn\")'"
      - "julia --project -e 'using Conda; Conda.add(\"matplotlib\")'"
    env:
      PYTHON: ""
    agents:
      config: cpu
      queue: central
      slurm_ntasks: 1

  - wait

  - label: "Lorenz"
    key: "lorenz"
    command: |
      export PYTHON="$$JULIA_DEPOT_PATH/conda/3/bin/python"
      export PYTHONHOME="$$JULIA_DEPOT_PATH/conda/3/bin"
      export CONDA_JL_HOME="$$JULIA_DEPOT_PATH/conda/3"

      mkdir examples/Lorenz/depot
      export JULIA_DEPOT_PATH="$$(pwd)/examples/Lorenz/depot:$$JULIA_DEPOT_PATH"

      julia --color=yes --project -e '
        println("--- Instantiating Project")
        using Pkg;
        Pkg.instantiate()
        Pkg.activate("examples/Lorenz")
        Pkg.instantiate()
        println("+++ Running Lorenz")
        include("examples/Lorenz/Lorenz_example.jl")'
    artifact_paths:
      - "examples/Lorenz/output/*.png"
    agents:
      config: cpu
      queue: central
      slurm_ntasks: 1

  - label: "Gaussian Process Emulator"
    key: "gaussian_process_emulator"
    command: |
      export PYTHON="$$JULIA_DEPOT_PATH/conda/3/bin/python"
      export PYTHONHOME="$$JULIA_DEPOT_PATH/conda/3/bin"
      export CONDA_JL_HOME="$$JULIA_DEPOT_PATH/conda/3"

      mkdir examples/GaussianProcessEmulator/depot
      export JULIA_DEPOT_PATH="$$(pwd)/examples/GaussianProcessEmulator/depot:$JULIA_DEPOT_PATH"

      julia --color=yes --project -e '
        println("--- Instantiating Project")
        using Pkg;
        Pkg.instantiate()
        Pkg.activate("examples/GaussianProcessEmulator")
        Pkg.instantiate()
        println("+++ Running Learn Noise")
        include("examples/GaussianProcessEmulator/learn_noise.jl")
        println("+++ Running PlotGP")
        include("examples/GaussianProcessEmulator/plot_GP.jl")'
    artifact_paths:
      - "examples/GaussianProcessEmulator/output/*.png"
    env:
      PYTHON: "$$JULIA_DEPOT_PATH/conda/3/bin/python"
      PYTHONHOME: "$$JULIA_DEPOT_PATH/conda/3/bin"
      CONDA_JL_HOME: "$$JULIA_DEPOT_PATH/conda/3"
    agents:
      config: cpu
      queue: central
      slurm_ntasks: 1

  - label: "Cloudy"
    key: "cloudy"
    command: |
      export PYTHON="$$JULIA_DEPOT_PATH/conda/3/bin/python"
      export PYTHONHOME="$$JULIA_DEPOT_PATH/conda/3/bin"
      export CONDA_JL_HOME="$$JULIA_DEPOT_PATH/conda/3"

      mkdir examples/Cloudy/depot
      export JULIA_DEPOT_PATH="$$(pwd)/examples/Cloudy/depot:$$JULIA_DEPOT_PATH"

      julia --color=yes --project -e '
        println("--- Instantiating Project")
        using Pkg;
        Pkg.instantiate()
        Pkg.activate("examples/Cloudy")
        Pkg.instantiate()
        println("+++ Running Cloudy")
        include("examples/Cloudy/Cloudy_example.jl")'
    artifact_paths:
      - "examples/Cloudy/output/*.png"
    agents:
      config: cpu
      queue: central
      slurm_ntasks: 1