Skip to content
ikb6 edited this page Apr 25, 2023 · 35 revisions

image

(https://microbetrace.cdc.gov/MicrobeTrace/)

NOTE: When you click on the link above and accept the EULA, MicrobeTrace will be automatically installed on your PC.

MicrobeTrace is an intuitive, free web-browser based application that renders existing data from genomic data and/or high-risk contact networks. The network visualization can be customized according to supplemental data sources like demographic data, gespatial data and mathematical inferences like the most probable transmission pathways. MicrobeTrace is a highly responsive, visual sequence analytics tool which overlay genomic and epi data using simple point and click interfaces , reducing the gap between data production and analytics and help you to discover, understand, and display relationships between patients, pathogen sequences or places (nodes). MicrobeTrace can be deployed on laptops to locations without any Internet access, thereby reducing both the startup cost and analysis time and effort.

Ready to explore MicrobeTrace?

Follow this link,

or read through the rest of the page for training resources before you try the tool.

If you'd rather just reach us to ask questions or would like a live demonstration of the tool, email us at : [email protected]

Download and read the user manuals below- now available in multiple languages!!

ENGLISH (https://github.com/CDCgov/MicrobeTrace/files/9577093/MicrobeTrace_User_Manual_v0.6.2_Oct_2021.pdf)

SPANISH (https://github.com/CDCgov/MicrobeTrace/raw/master/docs/MicrobeTrace_manual_May_2021_Espanol_508.docx)

FRENCH (https://github.com/CDCgov/MicrobeTrace/raw/master/docs/MicrobeTrace_manual_May_2021_FRENCH(FRANCE).docx)

If you prefer watching a demo, click below for the training webinar

https://www.youtube.com/watch?v=5E-_Kb7yvHU)

Before Use

Loading Files

Types of Files:

Special Files:

Simulated Data:

Views

View Docs Demo
2D Network Read 🗎 Watch ▶️
3D Network Read 🗎 Watch ▶️
Histogram Read 🗎 Watch ▶️
Table Read 🗎 Watch ▶️
Aggregation Read 🗎 Watch ▶️
Bubbles Read 🗎 Watch ▶️
Flow Diagram Read 🗎 Watch ▶️
Scatterplot Read 🗎
Waterfall Read 🗎 Watch ▶️
Map Read 🗎 Watch ▶️
Globe Read 🗎
Gantt Read 🗎 Watch ▶️
Timeline Read 🗎
Heatmap Read 🗎 Watch ▶️
Phylogenetic Tree Read 🗎 Watch ▶️
Sequences Read 🗎 Watch ▶️

More

Advanced

Clone this wiki locally