You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
I think we need to download all gbenv* files from https://ftp.ncbi.nlm.nih.gov/genbank/gbenv1 e.g. gbenv1.seq.gz - gbenv72.seq.gz, then extract them and parse all the VERSION AB000684.1 values to get a list of accessions like
AB000684.1
Then we can use that list to filter out all the environmental samples from the NT fasta files the next time we run BWA
The text was updated successfully, but these errors were encountered:
I think we need to download all
gbenv*
files from https://ftp.ncbi.nlm.nih.gov/genbank/gbenv1 e.g.gbenv1.seq.gz - gbenv72.seq.gz
, then extract them and parse all theVERSION AB000684.1
values to get a list of accessions likeThen we can use that list to filter out all the environmental samples from the NT fasta files the next time we run BWA
The text was updated successfully, but these errors were encountered: