Fixes from Juelich jureca deployment #545
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pramodk
commented
Oct 9, 2019
pramodk
commented
- flex & bison dependency missing after mod2c was made submodule
- flex & bison dependency missing after mod2c was made submodule - use boost from external - bzip2 url changed, see #495
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- serial prefix for neuron~mpi - coreneuron flex/bison dependency was missing - install numpy explicitly to avoid bluepy building issue with python2
…or python libraries
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ping @jorblancoa |
jorblancoa
approved these changes
Nov 6, 2019
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Can one of the admins verify this patch? |
jorblancoa
previously approved these changes
Feb 24, 2020
matz-e
previously approved these changes
Feb 25, 2020
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Please retest |
* Whitelist brion module * Set boost as buildable
Codecov Report
@@ Coverage Diff @@
## develop #545 +/- ##
==========================================
Coverage ? 76.27%
==========================================
Files ? 227
Lines ? 27663
Branches ? 5319
==========================================
Hits ? 21099
Misses ? 5317
Partials ? 1247
Continue to review full report at Codecov.
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* Whitelist modules (mousify, py-sonata-network-reduction, brion) * Enable autoload modules
matz-e
previously approved these changes
Mar 13, 2020
…6' into pr/juelich-update
- See https://github.com/zeromq/pyzmq/wiki/Building-and-Installing-PyZMQ#building-pyzmq-from-source - This is require because Spack doesn't set PKG_CONFIG and many other variables for external packages. This results in use of system package.
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Update deployment scripts Update intel build system to support intel-mpi-external
- also added latest releases of bluepyopt and efel
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This was referenced Apr 1, 2020
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pramodk
commented
Apr 1, 2020
* Simplify deployment scripts * Add new changes from #759 - Increase py-pandas version dependency to 0.25 on py-sonata-network-reduction
* Add deployment scripts * Update packages.yaml and modules.yaml * Update py-sonata-network-reduction package and dependencies * Add latest py-jupyter-core and py-jupyter-client from upstream * Install zeromq with %intel to avoid issue when running py-bluepyopt (see zeromq/libzmq#3313)
jorblancoa
approved these changes
Apr 6, 2020
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