DESCRIPTION

Package: AnnotationForge
Title: Tools for building SQLite-based annotation data packages
Description: Provides code for generating Annotation packages and
        their databases.  Packages produced are intended to be
        used with AnnotationDbi.
biocViews: Annotation, Infrastructure
URL: https://bioconductor.org/packages/AnnotationForge
BugReports: https://github.com/Bioconductor/AnnotationForge/issues
Version: 1.49.0
License: Artistic-2.0
Encoding: UTF-8
Authors@R: c(
        person("Marc", "Carlson", role = "aut"),
        person("Hervé", "Pagès", role = "aut"),
        person("Madelyn", "Carlson", role = "ctb",
                comment = "'Creating probe packages' vignette translation from Sweave to Rmarkdown / HTML"),
        person("Bioconductor Package Maintainer", role = "cre",
                email = "maintainer@bioconductor.org")
        )
Depends: R (>= 3.5.0), methods, utils, BiocGenerics (>= 0.15.10),
        Biobase (>= 1.17.0), AnnotationDbi (>= 1.33.14)
Imports: DBI, RSQLite, XML, S4Vectors, RCurl
Suggests: biomaRt, httr, GenomeInfoDb (>= 1.17.1), Biostrings, affy,
        hgu95av2.db, human.db0, org.Hs.eg.db,
        Homo.sapiens, GO.db, rmarkdown,
        BiocStyle, knitr, BiocManager, BiocFileCache, RUnit
VignetteBuilder: knitr
BuildKeepEmpty: TRUE
Collate: makeAnnDbPkg.R sqlForge_utils.R sqlForge_baseMapBuilder.R
        sqlForge_schemaGen.R sqlForge_tableBuilder.R
        sqlForge_makeAnnPkgs.R sqlForge_wrapBaseDBPkgs.R
        sqlForge_seqnames.R makeProbePackage.R
        makeOrgPackage.R makeChipPackageFromDataFrames.R
        makeOrgPackageFromNCBI.R NCBI_getters.R makeInparanoidDbs.R
        test_AnnotationForge_package.R
Date: 2024-10-28