- Published work: "The Context Matrix: Navigating Biological Complexity for Advanced BioDesign"
- MFD experiments [crossref]
- cm967 (latest) image pre-processing pipeline
- cm967 (latest) image analysis pipeline
- Plate reader experiments [crossref]
- pre-processed data
- analysis Jupyter Notebooks
[crossref]
- MFD DXF design files for standard photo-lithography [crossref]
- MFD design files [crossref]
- for Nanoscribe nano3D printing
- AutoDesk Fusion 360/Inventor files [dimensions: 3D]
- DeScribe files [dimensions: 3D]
- NanoWrite files [dimensions: 3D]
- for standard photo-lithography master blue prints (MBPs) [dimensions: 2D; file format: DXF]
- for Nanoscribe nano3D printing
- Python scripts for Blender MFD feature design automation of STLs for Nanoscribe [dimensions: 3D; file format: .py] [crossref]
- Design and assembly files for reusable OptoSelect-BLADE system [crossref]
- Novel Spectra Viewer [crossref]
- Fluorophore Set Orthogonality Evaluator [crossref]
- De Novo Orthogonal Oligo Generator [crossref]
- FISH Barcode Architecture Modelling [crossref]
- iBF:DNAA-OT2 : Jupyter Notebooks for DNA assembly using the Opentrons OT-2 [crossref]
- iBF:DNAA-Echo : Jupyter Notebooks for DNA assembly using the Labcyte Echo [crossref]
- iBF:ExPrep-OT2 : Jupyter Notebooks for experiment preparation using the Opentrons OT-2 [crossref]
Steps for future work, in the first instance, generating Hill Plot part characterisations at single-cell, time-lapse detail:
- Design of sequential inducer assay
- Design of gradient inducer assay
- MFD DXF design files for gradient mixer