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suggestion: bustools count should more gracefully handle if a transcript exists in transcripts.txt file but not in t2g file #94

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Yenaled opened this issue Jul 16, 2023 · 0 comments
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enhancement New feature or request

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Yenaled commented Jul 16, 2023

Right now, it would infinite loop if the --umi-gene option is enabled (without --umi-gene, it would output a mtx file where an erroneous entry is given the value of 0). This also should be fixed in the kb_python unit test where there's a mismatch between transcripts.txt and transcripts_to_genes.txt.

@Yenaled Yenaled added the enhancement New feature or request label Jul 16, 2023
@Yenaled Yenaled self-assigned this Jul 16, 2023
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