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As the title says, the line --save_align_intermeds should be removed from rna-seq template's lablog as it leaves huge intermediate files that are not used in later steps of the workflow
As the title says, the line
--save_align_intermeds
should be removed from rna-seq template's lablog as it leaves huge intermediate files that are not used in later steps of the workflowhere is the specific line:
https://github.com/BU-ISCIII/buisciii-tools/blob/3accca9be01a9c9a5c07ebc7f63e771c91968ccf/bu_isciii/templates/rnaseq/ANALYSIS/DATE_ANALYSIS01_RNASEQ/lablog#L25C1-L26C1
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