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Remove --save_align_intermeds from rna-seq template #196

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Shettland opened this issue Feb 9, 2024 · 0 comments · Fixed by #271
Closed

Remove --save_align_intermeds from rna-seq template #196

Shettland opened this issue Feb 9, 2024 · 0 comments · Fixed by #271
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@Shettland
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As the title says, the line --save_align_intermeds should be removed from rna-seq template's lablog as it leaves huge intermediate files that are not used in later steps of the workflow

here is the specific line:
https://github.com/BU-ISCIII/buisciii-tools/blob/3accca9be01a9c9a5c07ebc7f63e771c91968ccf/bu_isciii/templates/rnaseq/ANALYSIS/DATE_ANALYSIS01_RNASEQ/lablog#L25C1-L26C1

@Shettland Shettland added bug Something isn't working enhancement New feature or request labels Feb 9, 2024
@saramonzon saramonzon self-assigned this May 31, 2024
@saramonzon saramonzon mentioned this issue May 31, 2024
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