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GDBIG.test.vcf
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GDBIG.test.vcf
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##fileformat=VCFv4.2
##FILTER=<ID=PASS,Description="All filters passed">
##FORMAT=<ID=DS,Number=1,Type=Float,Description="estimated ALT dose [P(RA) + P(AA)]">
##FORMAT=<ID=GP,Number=G,Type=Float,Description="Estimated Genotype Probability">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##bcftools_concatVersion=1.9+htslib-1.9
##reference=file:/GRCh38/GCA_000001405.15_GRCh38_no_alt_analysis_set.fa
#CHROM POS ID REF ALT QUAL FILTER INFO
chr22 10515882 rs1490973086 G A . PASS AR2=0.63;DR2=0.68
chr22 10516264 . TAC T . PASS AR2=0.78;DR2=0.78
chr22 10516615 rs1228174166 TTTG T . PASS AR2=0.221;DR2=0.222
chr22 10518420 rs1177693979 CA C . PASS AR2=0.547;DR2=0.607
chr22 10519243 rs1186022611 A AG . PASS AR2=0.673;DR2=0.707
chr22 10519428 rs1361775216 C T . PASS AR2=0.799;DR2=0.828
chr22 10520657 rs1467462910 C G . PASS AR2=0.654;DR2=0.687
chr22 10521776 . A AT . PASS AR2=0.635;DR2=0.635
chr22 10522996 . G A . PASS AR2=0.96;DR2=0.96
chr22 10525337 . TTAAA T . PASS AR2=0.667;DR2=0.667
chr22 10525863 rs1424443786 GCTTTTTGCGCCCCGCCGCGGCGA G . PASS AR2=0.579;DR2=0.579
chr22 10526217 rs1248504347 A G . PASS AR2=0.85;DR2=0.876
chr22 10526299 . A AT . PASS AR2=0.908;DR2=0.919
chr22 10526331 rs1273457090 ACCGCCGCCGCGGGTTTTTTCCC A . PASS AR2=0.972;DR2=0.972
chr22 10526929 rs1450244074 CTGCCCCCGCCGCCGAGGCTTTT C . PASS AR2=0.28;DR2=0.315
chr22 10527169 rs1298885914 TGCCGCCATAGCTTTTTACCCGC T . PASS AR2=0.293;DR2=0.309
chr22 10527258 rs1334404621 CTTTTTGCCCCCGCCGCGGA C . PASS AR2=0.002;DR2=0.02
chr22 10527958 . CT C . PASS AR2=0.008;DR2=0.023
chr22 10531789 rs1216476262 G GATGAA . PASS AR2=0.607;DR2=0.674
chr22 10531812 . GATGAA G . PASS AR2=0.934;DR2=0.934
chr22 10534499 rs1223945184 C A . PASS AR2=0.792;DR2=0.792
chr22 10534557 . G GT . PASS AR2=0.823;DR2=0.86
chr22 10534560 rs1201333134 TTTTTG T . PASS AR2=0.953;DR2=0.953
chr22 10550966 rs1436460593 C T . PASS AR2=0.834;DR2=0.862
chr22 10551084 rs1403110882 GCA G . PASS AR2=0.93;DR2=0.93
chr22 10551121 rs1286184399 C T . PASS AR2=0.809;DR2=0.841
chr22 10551164 rs1252500398 A C . PASS AR2=0.625;DR2=0.687
chr22 10559647 rs1295749031 G A . PASS AR2=0.969;DR2=0.969
chr22 10559649 rs1439398902 C T . PASS AR2=0.944;DR2=0.945
chr22 10559676 rs1259742422 G A . PASS AR2=0.864;DR2=0.898
chr22 10559885 rs1407714268 C T . PASS AR2=0.849;DR2=0.867
chr22 10560625 rs1330790837 TTTC T . PASS AR2=0.067;DR2=0.081
chr22 10561490 . AGG A . PASS AR2=0.182;DR2=0.203
chr22 10562526 rs1243406316 TAG T . PASS AR2=0.542;DR2=0.602
chr22 10562747 rs1263013203 AGTTTT A . PASS AR2=0.65;DR2=0.685
chr22 10562806 rs1445473902 C T . PASS AR2=0.67;DR2=0.71
chr22 10562888 rs1289381056 T C . PASS AR2=0.785;DR2=0.814
chr22 10565287 rs1482739948 T C . PASS AR2=0.545;DR2=0.598
chr22 10566898 rs1176749520 CGAGA C . PASS AR2=0.607;DR2=0.607
chr22 10568148 . A AC . PASS AR2=0.583;DR2=0.656
chr22 10568421 rs1218811398 A G . PASS AR2=0.788;DR2=0.831
chr22 10568422 rs1320562603 T C . PASS AR2=0.747;DR2=0.797
chr22 10568425 . A G . PASS AR2=0.927;DR2=0.929
chr22 10568436 rs1368991195 T TA . PASS AR2=0.853;DR2=0.877
chr22 10570294 rs1343403273 G A . PASS AR2=0.727;DR2=0.766
chr22 10570455 rs1243893653 C T . PASS AR2=0.5;DR2=0.582
chr22 10571197 rs1453063163 T G . PASS AR2=0.752;DR2=0.757
chr22 10571238 rs1375789375 C T . PASS AR2=0.826;DR2=0.834
chr22 10571239 rs1197893888 C G . PASS AR2=0.826;DR2=0.834
chr22 10571480 rs1449405968 C A . PASS AR2=0.653;DR2=0.694
chr22 10571526 rs1487211175 CG C . PASS AR2=0.818;DR2=0.818
chr22 10571582 . C CCCG . PASS AR2=0.577;DR2=0.606
chr22 10571588 rs1175827481 GCCGCCGCGACTTTTTGC G . PASS AR2=0.57;DR2=0.594
chr22 10571738 rs1568896584 CGCGGCTTTTTGCTCCCCCCCGCTCCGGTGTCGCTGTTATTTTGCCCGCT C . PASS AR2=0.641;DR2=0.687
chr22 10572185 rs1265676577 GC G . PASS AR2=0.641;DR2=0.702
chr22 10572216 rs1436492848 G A . PASS AR2=0.775;DR2=0.812
chr22 10573497 rs1252223090 G C . PASS AR2=0.807;DR2=0.839
chr22 10577480 rs1448670975 T C . PASS AR2=0.586;DR2=0.586
chr22 10577521 . CAT C . PASS AR2=0.652;DR2=0.698
chr22 10577629 rs1349225949 T TA . PASS AR2=0.808;DR2=0.836
chr22 10577666 rs1491296197 CAT C . PASS AR2=0.847;DR2=0.847
chr22 10577851 . TA T . PASS AR2=0.697;DR2=0.697
chr22 10580900 . ATTC A . PASS AR2=0.973;DR2=0.973
chr22 10581005 rs1268262722 C T . PASS AR2=0.946;DR2=0.946
chr22 10581404 rs1283129074 G A . PASS AR2=0.907;DR2=0.922
chr22 10581518 rs1318646482 T A . PASS AR2=0.537;DR2=0.574
chr22 10582927 rs1301410597 G T . PASS AR2=0.969;DR2=0.969
chr22 10585295 rs1217904605 T TA . PASS AR2=0.922;DR2=0.922
chr22 10586832 rs1169204939 C T . PASS AR2=0.818;DR2=0.868
chr22 10587411 . G T . PASS AR2=0.793;DR2=0.793
chr22 10587416 . C T . PASS AR2=0.784;DR2=0.784
chr22 10588234 . T A . PASS AR2=0.909;DR2=0.909
chr22 10588258 . A C . PASS AR2=0.938;DR2=0.938
chr22 10588274 . AT A . PASS AR2=0.947;DR2=0.947
chr22 10593165 rs1265801002 GT G . PASS AR2=0.771;DR2=0.771
chr22 10595472 rs1264446065 C A . PASS AR2=0.781;DR2=0.781