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snp-dists sometimes will not create distance matrix #6

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taranewman opened this issue Jan 11, 2024 · 0 comments · Fixed by #7

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taranewman commented Jan 11, 2024

When running the pipeline, the distances.tsv file created at this step will sometimes not be published in the output directory
https://github.com/BCCDC-PHL/snippy-core-phylogenomics/blob/master/modules/snp_dists.nf

The snp-dists tool will work when run outside of the pipeline.

taranewman mentioned this issue

Matrix table fix #7

Merged

taranewman closed this as completed in #7

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