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clm-kg.obo
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clm-kg.obo
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format-version: 1.2
data-version: clm/releases/2024-07-31/clm-kg.owl
idspace: dce http://purl.org/dc/elements/1.1/
idspace: dcterms http://purl.org/dc/terms/
idspace: oboInOwl http://www.geneontology.org/formats/oboInOwl#
ontology: clm/clm-kg
property_value: dce:type IAO:8000001
property_value: dcterms:description "None" xsd:string
property_value: dcterms:license https://creativecommons.org/licenses/unspecified
property_value: dcterms:title "Cell Markers Ontology" xsd:string
property_value: owl:versionInfo "2024-07-31" xsd:string
[Term]
id: CL:0000000
comment: A cell in the Human Lung has the gene markers PCLAF, RRM2, UBE2C, NUSAP1 with a NS-Forest FBeta value of 0.26. {xref="https://doi.org/10.5281/zenodo.11165918"}
relationship: RO:0015004 CL:4037006 ! has characterizing marker set NS forest marker set of cell (Human Lung).
property_value: RO:0002175 NCBITaxon:9606
[Term]
id: CL:0000583
comment: A alveolar macrophage in the Human Lung has the gene markers MSR1, FABP4 with a NS-Forest FBeta value of 0.8. {xref="https://doi.org/10.5281/zenodo.11165918"}
relationship: RO:0015004 CL:4037003 ! has characterizing marker set NS forest marker set of alveolar macrophage (Human Lung).
property_value: RO:0002175 NCBITaxon:9606
[Term]
id: CL:4028004
comment: A alveolar type 1 fibroblast cell in the Human Lung has the gene markers AOC3, LUM with a NS-Forest FBeta value of 0.7. {xref="https://doi.org/10.5281/zenodo.11165918"}
relationship: RO:0015004 CL:4037002 ! has characterizing marker set NS forest marker set of alveolar type 1 fibroblast cell (Human Lung).
property_value: RO:0002175 NCBITaxon:9606
[Term]
id: CL:4028006
comment: A alveolar adventitial fibroblast in the Human Lung has the gene markers SCARA5, CD248 with a NS-Forest FBeta value of 0.85. {xref="https://doi.org/10.5281/zenodo.11165918"}
relationship: RO:0015004 CL:4037001 ! has characterizing marker set NS forest marker set of alveolar adventitial fibroblast (Human Lung).
property_value: RO:0002175 NCBITaxon:9606
[Term]
id: CL:4033041
comment: A CCL3-positive alveolar macrophage in the Human Lung has the gene markers TNIP3, CXCL5 with a NS-Forest FBeta value of 0.67. {xref="https://doi.org/10.5281/zenodo.11165918"}
relationship: RO:0015004 CL:4037004 ! has characterizing marker set NS forest marker set of CCL3-positive alveolar macrophage (Human Lung).
property_value: RO:0002175 NCBITaxon:9606
[Term]
id: CL:4033042
comment: A metallothionein-positive alveolar macrophage in the Human Lung has the gene markers HMOX1, HPGD with a NS-Forest FBeta value of 0.41. {xref="https://doi.org/10.5281/zenodo.11165918"}
relationship: RO:0015004 CL:4037005 ! has characterizing marker set NS forest marker set of metallothionein-positive alveolar macrophage (Human Lung).
property_value: RO:0002175 NCBITaxon:9606
[Term]
id: CL:4037001
name: NS forest marker set of alveolar adventitial fibroblast (Human Lung).
is_a: SO:0001260
relationship: BFO:0000051 http://identifiers.org/ensembl/ENSG00000168079 ! SCARA5
relationship: BFO:0000051 http://identifiers.org/ensembl/ENSG00000174807 ! CD248
property_value: STATO:0000663 "0.85" xsd:string
[Term]
id: CL:4037002
name: NS forest marker set of alveolar type 1 fibroblast cell (Human Lung).
is_a: SO:0001260
relationship: BFO:0000051 http://identifiers.org/ensembl/ENSG00000131471 ! AOC3
relationship: BFO:0000051 http://identifiers.org/ensembl/ENSG00000139329 ! LUM
property_value: STATO:0000663 "0.7" xsd:string
[Term]
id: CL:4037003
name: NS forest marker set of alveolar macrophage (Human Lung).
is_a: SO:0001260
relationship: BFO:0000051 http://identifiers.org/ensembl/ENSG00000038945 ! MSR1
relationship: BFO:0000051 http://identifiers.org/ensembl/ENSG00000170323 ! FABP4
property_value: STATO:0000663 "0.8" xsd:string
[Term]
id: CL:4037004
name: NS forest marker set of CCL3-positive alveolar macrophage (Human Lung).
is_a: SO:0001260
relationship: BFO:0000051 http://identifiers.org/ensembl/ENSG00000050730 ! TNIP3
relationship: BFO:0000051 http://identifiers.org/ensembl/ENSG00000163735 ! CXCL5
property_value: STATO:0000663 "0.67" xsd:string
[Term]
id: CL:4037005
name: NS forest marker set of metallothionein-positive alveolar macrophage (Human Lung).
is_a: SO:0001260
relationship: BFO:0000051 http://identifiers.org/ensembl/ENSG00000100292 ! HMOX1
relationship: BFO:0000051 http://identifiers.org/ensembl/ENSG00000164120 ! HPGD
property_value: STATO:0000663 "0.41" xsd:string
[Term]
id: CL:4037006
name: NS forest marker set of cell (Human Lung).
is_a: SO:0001260
relationship: BFO:0000051 http://identifiers.org/ensembl/ENSG00000137804 ! NUSAP1
relationship: BFO:0000051 http://identifiers.org/ensembl/ENSG00000166803 ! PCLAF
relationship: BFO:0000051 http://identifiers.org/ensembl/ENSG00000171848 ! RRM2
relationship: BFO:0000051 http://identifiers.org/ensembl/ENSG00000175063 ! UBE2C
property_value: STATO:0000663 "0.26" xsd:string
[Term]
id: http://identifiers.org/ensembl/ENSG00000038945
name: MSR1
is_a: SO:0000704
[Term]
id: http://identifiers.org/ensembl/ENSG00000050730
name: TNIP3
is_a: SO:0000704
[Term]
id: http://identifiers.org/ensembl/ENSG00000100292
name: HMOX1
is_a: SO:0000704
[Term]
id: http://identifiers.org/ensembl/ENSG00000131471
name: AOC3
is_a: SO:0000704
[Term]
id: http://identifiers.org/ensembl/ENSG00000137804
name: NUSAP1
is_a: SO:0000704
[Term]
id: http://identifiers.org/ensembl/ENSG00000139329
name: LUM
is_a: SO:0000704
[Term]
id: http://identifiers.org/ensembl/ENSG00000163735
name: CXCL5
is_a: SO:0000704
[Term]
id: http://identifiers.org/ensembl/ENSG00000164120
name: HPGD
is_a: SO:0000704
[Term]
id: http://identifiers.org/ensembl/ENSG00000166803
name: PCLAF
is_a: SO:0000704
[Term]
id: http://identifiers.org/ensembl/ENSG00000168079
name: SCARA5
is_a: SO:0000704
[Term]
id: http://identifiers.org/ensembl/ENSG00000170323
name: FABP4
is_a: SO:0000704
[Term]
id: http://identifiers.org/ensembl/ENSG00000171848
name: RRM2
is_a: SO:0000704
[Term]
id: http://identifiers.org/ensembl/ENSG00000174807
name: CD248
is_a: SO:0000704
[Term]
id: http://identifiers.org/ensembl/ENSG00000175063
name: UBE2C
is_a: SO:0000704
[Typedef]
id: RO:0015004
name: has characterizing marker set