Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Norwegian survey should not be used #29

Closed
LaurenePecuchet opened this issue Aug 23, 2023 · 6 comments
Closed

Norwegian survey should not be used #29

LaurenePecuchet opened this issue Aug 23, 2023 · 6 comments
Labels
invalid This doesn't seem right survey

Comments

@LaurenePecuchet
Copy link
Collaborator

The Norwegian bottom trawl survey that has been used so far in FishGlob has many errors and should not be used in any analysis until it has been replaced by the correct dataset.

@AquaAuma
Copy link
Owner

AquaAuma commented Sep 4, 2023

@tomjwebb and @edwardlavender big warning here, we were recently notified by IMR about this, and we will replace the Norwegian survey dataset in the coming week(s)

@edwardlavender
Copy link

Thanks for the heads up!

@AquaAuma AquaAuma added the survey label Sep 5, 2023
@edwardlavender
Copy link

By the way, I noticed in passing that the Norwegian survey data includes 'depths' -1 m and 0 m. Just flagging this one here on the off chance you weren't aware of it alongside the other issues in the Norwegian data!

load(url("https://github.com/AquaAuma/FishGlob_data/blob/main/outputs/Compiled_data/FishGlob_public_clean.RData?raw=true"))
range(data$depth, na.rm = TRUE)
[1]   -1.00 2856.22
library(dplyr)
  data |>
    filter(depth <= 1) |> 
    group_by(survey) |> 
    summarise(n = n())
# A tibble: 1 × 2
  survey      n
  <chr>   <int>
1 Nor-BTS   307

@AquaAuma
Copy link
Owner

AquaAuma commented Nov 1, 2023

that might disappear with the new dataset because it's quite a different one

@AquaAuma
Copy link
Owner

AquaAuma commented Nov 1, 2023

@LaurenePecuchet are we all good with the code or are there things I need to double check besides loading the data?

@AquaAuma AquaAuma added the invalid This doesn't seem right label Nov 2, 2023
@AquaAuma
Copy link
Owner

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
invalid This doesn't seem right survey
Projects
None yet
Development

No branches or pull requests

3 participants