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@Amber-MD

Amber Molecular Dynamics

For experienced Amber users: development versions of some parts of AmberTools
README.md
  • Amber is a collection of programs that implement biomolecular simulations at the atomic level, primarily through molecular dynamics.
  • This collection of repositories is an adjunct to the main Amber site at https://ambermd.org
  • Material here is public, but is intended for advanced users, who have already installed the codes at the web page above.
    • Several of the repositories here support the ongoing development of the Amber and AmberTools code bases and are not actually useful for running Amber.
    • The applications available in repositories here have value as standalone applications, but are also all included as part of the AmberTools distribution.

Popular repositories Loading

  1. pytraj pytraj Public

    Python interface of cpptraj

    Jupyter Notebook 173 38

  2. cpptraj cpptraj Public

    Biomolecular simulation trajectory/data analysis.

    C++ 139 64

  3. common-dockerfiles common-dockerfiles Public

    Docker images used for the Amber project

    Dockerfile 4 4

  4. jenkins-shared-libraries jenkins-shared-libraries Public

    Shared pipelines for Jenkins

    Groovy 2

  5. AmberClassic AmberClassic Public

    Subset of AmberTools, with updates and modifications

    C++ 2

  6. .github .github Public

    just holding a README file describing what this place is about.

Repositories

Showing 6 of 6 repositories
  • AmberClassic Public

    Subset of AmberTools, with updates and modifications

    Amber-MD/AmberClassic’s past year of commit activity
    C++ 2 0 0 0 Updated Dec 11, 2024
  • pytraj Public

    Python interface of cpptraj

    Amber-MD/pytraj’s past year of commit activity
    Jupyter Notebook 173 38 38 2 Updated Dec 11, 2024
  • cpptraj Public

    Biomolecular simulation trajectory/data analysis.

    Amber-MD/cpptraj’s past year of commit activity
    C++ 139 64 68 (1 issue needs help) 1 Updated Dec 6, 2024
  • jenkins-shared-libraries Public

    Shared pipelines for Jenkins

    Amber-MD/jenkins-shared-libraries’s past year of commit activity
    Groovy 2 GPL-3.0 0 0 1 Updated Oct 17, 2024
  • common-dockerfiles Public

    Docker images used for the Amber project

    Amber-MD/common-dockerfiles’s past year of commit activity
    Dockerfile 4 4 0 0 Updated Oct 15, 2024
  • .github Public

    just holding a README file describing what this place is about.

    Amber-MD/.github’s past year of commit activity
    0 0 0 0 Updated Feb 23, 2023

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