NAMESPACE

# Generated by roxygen2: do not edit by hand

export(buildMappingBasedMarkerPanel)
export(buildPanel_oneCluster)
export(buildQualityTable)
export(buildTreeFromGenePanel)
export(cellToClusterMapping_byCor)
export(cellToClusterMapping_byRank)
export(corTreeMapping)
export(corTreeMapping_withFilter)
export(distTreeMapping)
export(filterByClass)
export(filterCells)
export(filterPanelGenes)
export(fishScaleAndMap)
export(fractionCorrectPerNode)
export(fractionCorrectWithGenes)
export(generateMultipleCellReferenceSet)
export(getBetaScore)
export(getBranchList)
export(getConfusionMatrix)
export(getDend)
export(getNodeHeight)
export(getTopMatch)
export(get_subtree_label)
export(labelDend)
export(layerFraction)
export(layerScale)
export(lca)
export(leafToNodeMedians)
export(makeLCAtable)
export(map_dend)
export(mergeFish)
export(outputTopConfused)
export(plotConfusionVsConfidence)
export(plotCorrectWithGenes)
export(plotDistributions)
export(plotHeatmap)
export(plotNodes)
export(plotTsne)
export(possibleClustersByPriors)
export(quantileTruncate)
export(resolve_cl)
export(rfTreeMapping)
export(rotateXY)
export(smartLayerAllocation)
export(subsampleCells)
export(summarizeMatrix)
export(update_mfishtools)