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Automatically detect OME ZARR thumbnail location #89

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SeanLeRoy opened this issue May 8, 2024 · 2 comments · Fixed by #143
Closed

Automatically detect OME ZARR thumbnail location #89

SeanLeRoy opened this issue May 8, 2024 · 2 comments · Fixed by #143
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@BrianWhitneyAI

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@SeanLeRoy
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The 3D web viewer is able to automatically render a low resolution version of any OME ZARR by checking the "manifest" file inside the OME ZARRs highest level directory and then rendering the path to the lowest resolution file as declared by that file
@SeanLeRoy
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Make sure to avoid rendering too huge of an image. In the manifest or config file look for the size of the resolution image (or by asking over http?) and don't render if too large

@SeanLeRoy
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https://github.com/allen-cell-animated/volume-viewer/blob/main/src/loaders/OmeZarrLoader.ts#L187

@BrianWhitneyAI BrianWhitneyAI mentioned this issue Jun 26, 2024
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Feature/zarr thumbnails AllenInstitute/biofile-finder
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@SeanLeRoy @BrianWhitneyAI