workflow: Avoid overwriting GEN_TOPO_MYDIR #10752

davidrohr · 2023-02-11T16:49:28Z

No description provided.

martenole · 2023-02-11T20:24:31Z

Thanks, this will add more stability. Sorry, saw this only after merging #10750 so there is one conflict now. Not sure if you prefer having the gen_topo_helper_functions sourced explicitly or not

alibuild · 2023-02-11T22:02:19Z

Error while checking build/O2/fullCI for a61b705 at 2023-02-11 23:02:

## sw/BUILD/o2checkcode-latest/log
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/Common/test/testGPUsortCUDA.cu:22:10: error: 'boost/test/unit_test.hpp' file not found [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUTracking/TRDTracking/GPUTRDTracker.cxx:37:10: error: 'omp.h' file not found [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUTracking/Base/GPUReconstruction.cxx:37:10: error: 'omp.h' file not found [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUTracking/Base/GPUReconstructionCPU.cxx:45:10: error: 'omp.h' file not found [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUTracking/display/GPUDisplay.cxx:36:10: error: 'omp.h' file not found [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUTracking/Base/cuda/GPUReconstructionCUDAGenRTC.cu:16:10: error: 'omp.h' file not found [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/cuda/../Shared/Utils.h:26:10: error: 'boost/program_options.hpp' file not found [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/cuda/../Shared/Utils.h:26:10: error: 'boost/program_options.hpp' file not found [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/Framework/Logger/include/Framework/Logger.h:14:10: error: 'fairlogger/Logger.h' file not found [clang-diagnostic-error]
/usr/local/cuda-12.0/include/cuda/std/detail/libcxx/include/type_traits:520:12: error: CUDA device code does not support variadic functions [clang-diagnostic-error]
/usr/local/cuda-12.0/include/cuda/std/detail/libcxx/include/type_traits:1059:69: error: CUDA device code does not support variadic functions [clang-diagnostic-error]
/usr/local/cuda-12.0/include/cuda/std/detail/libcxx/include/type_traits:1175:5: error: CUDA device code does not support variadic functions [clang-diagnostic-error]
/usr/local/cuda-12.0/include/cuda/std/detail/libcxx/include/type_traits:1852:16: error: CUDA device code does not support variadic functions [clang-diagnostic-error]
/usr/local/cuda-12.0/include/cuda/std/detail/libcxx/include/type_traits:2276:18: error: CUDA device code does not support variadic functions [clang-diagnostic-error]
/usr/local/cuda-12.0/include/cuda/std/detail/libcxx/include/type_traits:4336:16: error: CUDA device code does not support variadic functions [clang-diagnostic-error]
/usr/local/cuda-12.0/include/sm_20_atomic_functions.h:103:39: error: redefinition of 'atomicAdd' [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/Framework/Logger/include/Framework/Logger.h:14:10: error: 'fairlogger/Logger.h' file not found [clang-diagnostic-error]
/usr/local/cuda-12.0/include/cuda/std/detail/libcxx/include/type_traits:520:12: error: CUDA device code does not support variadic functions [clang-diagnostic-error]
/usr/local/cuda-12.0/include/cuda/std/detail/libcxx/include/type_traits:1059:69: error: CUDA device code does not support variadic functions [clang-diagnostic-error]
/usr/local/cuda-12.0/include/cuda/std/detail/libcxx/include/type_traits:1175:5: error: CUDA device code does not support variadic functions [clang-diagnostic-error]
/usr/local/cuda-12.0/include/cuda/std/detail/libcxx/include/type_traits:1852:16: error: CUDA device code does not support variadic functions [clang-diagnostic-error]
/usr/local/cuda-12.0/include/cuda/std/detail/libcxx/include/type_traits:2276:18: error: CUDA device code does not support variadic functions [clang-diagnostic-error]
/usr/local/cuda-12.0/include/cuda/std/detail/libcxx/include/type_traits:4336:16: error: CUDA device code does not support variadic functions [clang-diagnostic-error]
/usr/local/cuda-12.0/include/sm_20_atomic_functions.h:103:39: error: redefinition of 'atomicAdd' [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/../Shared/Utils.h:146:34: error: use of undeclared identifier 'int4'; did you mean 'int'? [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/benchmark.hip.cxx:199:35: error: use of undeclared identifier 'int4'; did you mean 'int'? [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/../Shared/Utils.h:146:34: error: use of undeclared identifier 'int4'; did you mean 'int'? [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:64:8: error: unknown type name '__host__' [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:64:27: error: expected ';' after top level declarator [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:64:33: error: overloaded 'operator+=' must have at least one parameter of class or enumeration type [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:64:44: error: unknown type name 'int4'; did you mean 'int'? [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:64:53: error: unknown type name 'int4'; did you mean 'int'? [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:66:4: error: member reference base type 'int' is not a structure or union [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:66:11: error: member reference base type 'int' is not a structure or union [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:67:4: error: member reference base type 'int' is not a structure or union [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:67:11: error: member reference base type 'int' is not a structure or union [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:68:4: error: member reference base type 'int' is not a structure or union [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:68:11: error: member reference base type 'int' is not a structure or union [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:69:4: error: member reference base type 'int' is not a structure or union [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:69:11: error: member reference base type 'int' is not a structure or union [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:85:1: error: unknown type name '__global__' [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:90:19: error: use of undeclared identifier 'blockIdx' [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:90:32: error: use of undeclared identifier 'blockDim' [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:90:45: error: use of undeclared identifier 'threadIdx' [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:90:78: error: use of undeclared identifier 'blockDim' [clang-diagnostic-error]
/sw/slc8_x86-64/GCC-Toolchain/v12.2.0-alice1-2/lib/gcc/x86_64-unknown-linux-gnu/12.2.0/../../../../include/c++/12.2.0/bits/shared_ptr_base.h:196:22: error: expected expression [clang-diagnostic-error]
/sw/slc8_x86-64/GCC-Toolchain/v12.2.0-alice1-2/lib/gcc/x86_64-unknown-linux-gnu/12.2.0/../../../../include/c++/12.2.0/bits/shared_ptr_base.h:196:22: error: type name does not allow function specifier to be specified [clang-diagnostic-error]
/sw/slc8_x86-64/GCC-Toolchain/v12.2.0-alice1-2/lib/gcc/x86_64-unknown-linux-gnu/12.2.0/../../../../include/c++/12.2.0/bits/shared_ptr_base.h:196:22: error: use of undeclared identifier 'noinline'; did you mean 'inline'? [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/Detectors/EMCAL/calibration/include/EMCALCalibration/EMCALCalibExtractor.h:36:10: error: 'omp.h' file not found [clang-diagnostic-error]

Full log here.

alibuild · 2023-02-12T16:19:47Z

Error while checking build/O2/fullCI for f72f75d at 2023-02-12 17:19:

## sw/BUILD/o2checkcode-latest/log
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/Common/test/testGPUsortCUDA.cu:22:10: error: 'boost/test/unit_test.hpp' file not found [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUTracking/TRDTracking/GPUTRDTracker.cxx:37:10: error: 'omp.h' file not found [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUTracking/Base/GPUReconstruction.cxx:37:10: error: 'omp.h' file not found [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUTracking/Base/GPUReconstructionCPU.cxx:45:10: error: 'omp.h' file not found [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUTracking/display/GPUDisplay.cxx:36:10: error: 'omp.h' file not found [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUTracking/Base/cuda/GPUReconstructionCUDAGenRTC.cu:16:10: error: 'omp.h' file not found [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/cuda/../Shared/Utils.h:26:10: error: 'boost/program_options.hpp' file not found [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/cuda/../Shared/Utils.h:26:10: error: 'boost/program_options.hpp' file not found [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/Framework/Logger/include/Framework/Logger.h:14:10: error: 'fairlogger/Logger.h' file not found [clang-diagnostic-error]
/usr/local/cuda-12.0/include/cuda/std/detail/libcxx/include/type_traits:520:12: error: CUDA device code does not support variadic functions [clang-diagnostic-error]
/usr/local/cuda-12.0/include/cuda/std/detail/libcxx/include/type_traits:1059:69: error: CUDA device code does not support variadic functions [clang-diagnostic-error]
/usr/local/cuda-12.0/include/cuda/std/detail/libcxx/include/type_traits:1175:5: error: CUDA device code does not support variadic functions [clang-diagnostic-error]
/usr/local/cuda-12.0/include/cuda/std/detail/libcxx/include/type_traits:1852:16: error: CUDA device code does not support variadic functions [clang-diagnostic-error]
/usr/local/cuda-12.0/include/cuda/std/detail/libcxx/include/type_traits:2276:18: error: CUDA device code does not support variadic functions [clang-diagnostic-error]
/usr/local/cuda-12.0/include/cuda/std/detail/libcxx/include/type_traits:4336:16: error: CUDA device code does not support variadic functions [clang-diagnostic-error]
/usr/local/cuda-12.0/include/sm_20_atomic_functions.h:103:39: error: redefinition of 'atomicAdd' [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/Framework/Logger/include/Framework/Logger.h:14:10: error: 'fairlogger/Logger.h' file not found [clang-diagnostic-error]
/usr/local/cuda-12.0/include/cuda/std/detail/libcxx/include/type_traits:520:12: error: CUDA device code does not support variadic functions [clang-diagnostic-error]
/usr/local/cuda-12.0/include/cuda/std/detail/libcxx/include/type_traits:1059:69: error: CUDA device code does not support variadic functions [clang-diagnostic-error]
/usr/local/cuda-12.0/include/cuda/std/detail/libcxx/include/type_traits:1175:5: error: CUDA device code does not support variadic functions [clang-diagnostic-error]
/usr/local/cuda-12.0/include/cuda/std/detail/libcxx/include/type_traits:1852:16: error: CUDA device code does not support variadic functions [clang-diagnostic-error]
/usr/local/cuda-12.0/include/cuda/std/detail/libcxx/include/type_traits:2276:18: error: CUDA device code does not support variadic functions [clang-diagnostic-error]
/usr/local/cuda-12.0/include/cuda/std/detail/libcxx/include/type_traits:4336:16: error: CUDA device code does not support variadic functions [clang-diagnostic-error]
/usr/local/cuda-12.0/include/sm_20_atomic_functions.h:103:39: error: redefinition of 'atomicAdd' [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/../Shared/Utils.h:146:34: error: use of undeclared identifier 'int4'; did you mean 'int'? [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:64:8: error: unknown type name '__host__' [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:64:27: error: expected ';' after top level declarator [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:64:33: error: overloaded 'operator+=' must have at least one parameter of class or enumeration type [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:64:44: error: unknown type name 'int4'; did you mean 'int'? [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:64:53: error: unknown type name 'int4'; did you mean 'int'? [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:66:4: error: member reference base type 'int' is not a structure or union [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:66:11: error: member reference base type 'int' is not a structure or union [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:67:4: error: member reference base type 'int' is not a structure or union [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:67:11: error: member reference base type 'int' is not a structure or union [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:68:4: error: member reference base type 'int' is not a structure or union [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:68:11: error: member reference base type 'int' is not a structure or union [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:69:4: error: member reference base type 'int' is not a structure or union [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:69:11: error: member reference base type 'int' is not a structure or union [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:85:1: error: unknown type name '__global__' [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:90:19: error: use of undeclared identifier 'blockIdx' [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:90:32: error: use of undeclared identifier 'blockDim' [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:90:45: error: use of undeclared identifier 'threadIdx' [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/Kernels.hip.cxx:90:78: error: use of undeclared identifier 'blockDim' [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/../Shared/Utils.h:146:34: error: use of undeclared identifier 'int4'; did you mean 'int'? [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/GPU/GPUbenchmark/hip/benchmark.hip.cxx:199:35: error: use of undeclared identifier 'int4'; did you mean 'int'? [clang-diagnostic-error]
/sw/slc8_x86-64/GCC-Toolchain/v12.2.0-alice1-2/lib/gcc/x86_64-unknown-linux-gnu/12.2.0/../../../../include/c++/12.2.0/bits/shared_ptr_base.h:196:22: error: expected expression [clang-diagnostic-error]
/sw/slc8_x86-64/GCC-Toolchain/v12.2.0-alice1-2/lib/gcc/x86_64-unknown-linux-gnu/12.2.0/../../../../include/c++/12.2.0/bits/shared_ptr_base.h:196:22: error: type name does not allow function specifier to be specified [clang-diagnostic-error]
/sw/slc8_x86-64/GCC-Toolchain/v12.2.0-alice1-2/lib/gcc/x86_64-unknown-linux-gnu/12.2.0/../../../../include/c++/12.2.0/bits/shared_ptr_base.h:196:22: error: use of undeclared identifier 'noinline'; did you mean 'inline'? [clang-diagnostic-error]
/sw/SOURCES/O2/10752-slc8_x86-64/0/Detectors/EMCAL/calibration/include/EMCALCalibration/EMCALCalibExtractor.h:36:10: error: 'omp.h' file not found [clang-diagnostic-error]

Full log here.

workflow: Avoid overwriting GEN_TOPO_MYDIR

a61b705

davidrohr requested a review from a team as a code owner February 11, 2023 16:49

Merge branch 'dev' into dev_pull_request2

f72f75d

davidrohr added 8 commits February 13, 2023 09:45

Update async_tmux.sh

4fd1a48

Update datadistribution.sh

31fc07c

Update dpl-workflow.sh

e7a615a

Update raw-reader.sh

105dd05

Update tf-reader.sh

7d135c9

Update start_tmux.sh

47dccb9

Update shm-tool.sh

190d654

Update run-workflow-on-inputlist.sh

4299183

davidrohr merged commit 2e481f1 into AliceO2Group:dev Feb 13, 2023

mconcas mentioned this pull request Feb 17, 2023

ITS-SV: Use dynamic TimeFrame splitting for GPU vertexer mconcas/AliceO2#50

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workflow: Avoid overwriting GEN_TOPO_MYDIR #10752

workflow: Avoid overwriting GEN_TOPO_MYDIR #10752

davidrohr commented Feb 11, 2023

martenole commented Feb 11, 2023

alibuild commented Feb 11, 2023

alibuild commented Feb 12, 2023

workflow: Avoid overwriting GEN_TOPO_MYDIR #10752

workflow: Avoid overwriting GEN_TOPO_MYDIR #10752

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davidrohr commented Feb 11, 2023

martenole commented Feb 11, 2023

alibuild commented Feb 11, 2023

alibuild commented Feb 12, 2023