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input.yml
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/
input.yml
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---
genomes:
-
name: Lindenbergia_philippensis
sequence_files:
- data/chloroset/Lindenbergia_philippensis.fasta
feature_files:
ndh:
- data/chloroset/ndh.tsv
ycf:
- data/chloroset/ycf.tsv
invertedRepeat:
- data/chloroset/invertedRepeat.tsv
-
name: Cistanche_phelypaea
sequence_files:
- data/chloroset/Cistanche_phelypaea.fasta
feature_files:
ndh:
- data/chloroset/ndh.tsv
ycf:
- data/chloroset/ycf.tsv
invertedRepeat:
- data/chloroset/invertedRepeat.tsv
-
name: Epifagus_virginiana
sequence_files:
- data/chloroset/Epifagus_virginiana.fasta
feature_files:
ndh:
- data/chloroset/ndh.tsv
ycf:
- data/chloroset/ycf.tsv
invertedRepeat:
- data/chloroset/invertedRepeat.tsv
-
name: Orobanche_gracilis
sequence_files:
- data/chloroset/Orobanche_gracilis.fasta
feature_files:
ndh:
- data/chloroset/ndh.tsv
ycf:
- data/chloroset/ycf.tsv
invertedRepeat:
- data/chloroset/invertedRepeat.tsv
-
name: Nicotiana_tabacum
sequence_files:
- data/chloroset/Nicotiana_tabacumA.fasta
- data/chloroset/Nicotiana_tabacumB.fasta
feature_files:
ndh:
- data/chloroset/ndh.tsv
ycf:
- data/chloroset/ycf.tsv
invertedRepeat:
- data/chloroset/invertedRepeat.tsv
-
name: Olea_europaea
sequence_files:
- data/chloroset/Olea_europaea.fasta
feature_files:
ndh:
- data/chloroset/ndh.tsv
ycf:
- data/chloroset/ycf.tsv
invertedRepeat:
- data/chloroset/invertedRepeat.tsv
-
name: Schwalbea_americana
sequence_files:
- data/chloroset/Schwalbea_americana.fasta
feature_files:
ndh:
- data/chloroset/ndh.tsv
ycf:
- data/chloroset/ycf.tsv
invertedRepeat:
- data/chloroset/invertedRepeat.tsv
tree: data/chloroset/species.tree
features:
invertedRepeat:
color: "#e7d3e2"
form: arrow
height: 30
visible: 1
ndh:
color: "#ff006e"
form: rect
height: 30
visible: 1
ycf:
color: "#ffaf00"
form: rect
height: 30
visible: 1