You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
During preequilibration and presimulation, amici only handles events at t=t0, the others are ignored. For debugging preequilibration failures, it would be convenient if one could switch off event handling also for regular simulations. The alternative would be re-importing the model without events, which is often inconvenient.
The text was updated successfully, but these errors were encountered:
For PEtab 2.0 we will require events to be processed during preequilibration. For PEtab 1.0, this wasn't explicitly specified, but there wasn't really a reason to assume that they should not be processed. Therefore, amici's non-event-handling could be considered a bug.
If we want to keep backward compatibility, we'll have to add such an option to enable/disable event processing.
However, I think, it would be less surprising, and thus, preferable to change the default. I am not sure how many users were aware of events not being processed during preequilibration.
During preequilibration and presimulation, amici only handles events at t=t0, the others are ignored. For debugging preequilibration failures, it would be convenient if one could switch off event handling also for regular simulations. The alternative would be re-importing the model without events, which is often inconvenient.
The text was updated successfully, but these errors were encountered: