diff --git a/requirements/constraints_py3.10.txt b/requirements/constraints_py3.10.txt index 35b0286cb..262951fbe 100644 --- a/requirements/constraints_py3.10.txt +++ b/requirements/constraints_py3.10.txt @@ -41,7 +41,7 @@ cloudpickle==3.0.0 # via dask comm==0.2.2 # via ipykernel -coverage==7.5.4 +coverage==7.6.0 # via partseg (pyproject.toml) czifile==2019.7.2 # via partseg (pyproject.toml) @@ -59,7 +59,7 @@ docutils==0.21.2 # via sphinx et-xmlfile==1.1.0 # via openpyxl -exceptiongroup==1.2.1 +exceptiongroup==1.2.2 # via # ipython # pytest @@ -151,7 +151,7 @@ magicgui==0.8.3 # via # partseg (pyproject.toml) # napari -mahotas==1.4.15 +mahotas==1.4.17 # via partseg (pyproject.toml) markdown-it-py==3.0.0 # via rich @@ -183,7 +183,7 @@ npe2==0.7.6 # via # -r requirements/version_denylist.txt # napari -numpy==1.26.4 +numpy==2.0.0 # via # partseg (pyproject.toml) # czifile @@ -243,7 +243,7 @@ pillow==10.4.0 # imageio # napari # scikit-image -pint==0.24.1 +pint==0.24.3 # via napari platformdirs==4.2.2 # via @@ -308,7 +308,7 @@ pyqt6==6.7.0 # via partseg (pyproject.toml) pyqt6-qt6==6.7.2 # via pyqt6 -pyqt6-sip==13.6.0 +pyqt6-sip==13.8.0 # via pyqt6 pyside2==5.15.2.1 # via diff --git a/requirements/constraints_py3.10_pydantic_1.txt b/requirements/constraints_py3.10_pydantic_1.txt index df800dfe4..8c0af3367 100644 --- a/requirements/constraints_py3.10_pydantic_1.txt +++ b/requirements/constraints_py3.10_pydantic_1.txt @@ -39,7 +39,7 @@ cloudpickle==3.0.0 # via dask comm==0.2.2 # via ipykernel -coverage==7.5.4 +coverage==7.6.0 # via partseg (pyproject.toml) czifile==2019.7.2 # via partseg (pyproject.toml) @@ -57,7 +57,7 @@ docutils==0.21.2 # via sphinx et-xmlfile==1.1.0 # via openpyxl -exceptiongroup==1.2.1 +exceptiongroup==1.2.2 # via # ipython # pytest @@ -149,7 +149,7 @@ magicgui==0.8.3 # via # partseg (pyproject.toml) # napari -mahotas==1.4.15 +mahotas==1.4.17 # via partseg (pyproject.toml) markdown-it-py==3.0.0 # via rich @@ -181,7 +181,7 @@ npe2==0.7.6 # via # -r requirements/version_denylist.txt # napari -numpy==1.26.4 +numpy==2.0.0 # via # partseg (pyproject.toml) # czifile @@ -241,7 +241,7 @@ pillow==10.4.0 # imageio # napari # scikit-image -pint==0.24.1 +pint==0.24.3 # via napari platformdirs==4.2.2 # via @@ -305,7 +305,7 @@ pyqt6==6.7.0 # via partseg (pyproject.toml) pyqt6-qt6==6.7.2 # via pyqt6 -pyqt6-sip==13.6.0 +pyqt6-sip==13.8.0 # via pyqt6 pyside2==5.15.2.1 # via diff --git a/requirements/constraints_py3.11.txt b/requirements/constraints_py3.11.txt index 3bcce47c2..5b5aff964 100644 --- a/requirements/constraints_py3.11.txt +++ b/requirements/constraints_py3.11.txt @@ -41,7 +41,7 @@ cloudpickle==3.0.0 # via dask comm==0.2.2 # via ipykernel -coverage==7.5.4 +coverage==7.6.0 # via partseg (pyproject.toml) czifile==2019.7.2 # via partseg (pyproject.toml) @@ -145,7 +145,7 @@ magicgui==0.8.3 # via # partseg (pyproject.toml) # napari -mahotas==1.4.15 +mahotas==1.4.17 # via partseg (pyproject.toml) markdown-it-py==3.0.0 # via rich @@ -177,7 +177,7 @@ npe2==0.7.6 # via # -r requirements/version_denylist.txt # napari -numpy==1.26.4 +numpy==2.0.0 # via # partseg (pyproject.toml) # czifile @@ -237,7 +237,7 @@ pillow==10.4.0 # imageio # napari # scikit-image -pint==0.24.1 +pint==0.24.3 # via napari platformdirs==4.2.2 # via @@ -302,7 +302,7 @@ pyqt6==6.7.0 # via partseg (pyproject.toml) pyqt6-qt6==6.7.2 # via pyqt6 -pyqt6-sip==13.6.0 +pyqt6-sip==13.8.0 # via pyqt6 pyside2==5.13.2 # via diff --git a/requirements/constraints_py3.11_docs.txt b/requirements/constraints_py3.11_docs.txt index c9c506f17..8ae860379 100644 --- a/requirements/constraints_py3.11_docs.txt +++ b/requirements/constraints_py3.11_docs.txt @@ -137,7 +137,7 @@ magicgui==0.8.3 # via # partseg (pyproject.toml) # napari -mahotas==1.4.15 +mahotas==1.4.17 # via partseg (pyproject.toml) markdown-it-py==3.0.0 # via rich @@ -169,7 +169,7 @@ npe2==0.7.6 # via # -r requirements/version_denylist.txt # napari -numpy==1.26.4 +numpy==2.0.0 # via # partseg (pyproject.toml) # czifile @@ -226,7 +226,7 @@ pillow==10.4.0 # imageio # napari # scikit-image -pint==0.24.1 +pint==0.24.3 # via napari platformdirs==4.2.2 # via @@ -285,7 +285,7 @@ pyqt6==6.7.0 # via partseg (pyproject.toml) pyqt6-qt6==6.7.2 # via pyqt6 -pyqt6-sip==13.6.0 +pyqt6-sip==13.8.0 # via pyqt6 pyside2==5.13.2 # via -r requirements/version_denylist.txt diff --git a/requirements/constraints_py3.11_pydantic_1.txt b/requirements/constraints_py3.11_pydantic_1.txt index 2e828b11f..117776350 100644 --- a/requirements/constraints_py3.11_pydantic_1.txt +++ b/requirements/constraints_py3.11_pydantic_1.txt @@ -39,7 +39,7 @@ cloudpickle==3.0.0 # via dask comm==0.2.2 # via ipykernel -coverage==7.5.4 +coverage==7.6.0 # via partseg (pyproject.toml) czifile==2019.7.2 # via partseg (pyproject.toml) @@ -143,7 +143,7 @@ magicgui==0.8.3 # via # partseg (pyproject.toml) # napari -mahotas==1.4.15 +mahotas==1.4.17 # via partseg (pyproject.toml) markdown-it-py==3.0.0 # via rich @@ -175,7 +175,7 @@ npe2==0.7.6 # via # -r requirements/version_denylist.txt # napari -numpy==1.26.4 +numpy==2.0.0 # via # partseg (pyproject.toml) # czifile @@ -235,7 +235,7 @@ pillow==10.4.0 # imageio # napari # scikit-image -pint==0.24.1 +pint==0.24.3 # via napari platformdirs==4.2.2 # via @@ -299,7 +299,7 @@ pyqt6==6.7.0 # via partseg (pyproject.toml) pyqt6-qt6==6.7.2 # via pyqt6 -pyqt6-sip==13.6.0 +pyqt6-sip==13.8.0 # via pyqt6 pyside2==5.13.2 # via diff --git a/requirements/constraints_py3.12.txt b/requirements/constraints_py3.12.txt index 1b925468c..defdd20cc 100644 --- a/requirements/constraints_py3.12.txt +++ b/requirements/constraints_py3.12.txt @@ -41,7 +41,7 @@ cloudpickle==3.0.0 # via dask comm==0.2.2 # via ipykernel -coverage==7.5.4 +coverage==7.6.0 # via partseg (pyproject.toml) czifile==2019.7.2 # via partseg (pyproject.toml) @@ -143,7 +143,7 @@ magicgui==0.8.3 # via # partseg (pyproject.toml) # napari -mahotas==1.4.15 +mahotas==1.4.17 # via partseg (pyproject.toml) markdown-it-py==3.0.0 # via rich @@ -175,7 +175,7 @@ npe2==0.7.6 # via # -r requirements/version_denylist.txt # napari -numpy==1.26.4 +numpy==2.0.0 # via # partseg (pyproject.toml) # czifile @@ -235,7 +235,7 @@ pillow==10.4.0 # imageio # napari # scikit-image -pint==0.24.1 +pint==0.24.3 # via napari platformdirs==4.2.2 # via @@ -300,7 +300,7 @@ pyqt6==6.7.0 # via partseg (pyproject.toml) pyqt6-qt6==6.7.2 # via pyqt6 -pyqt6-sip==13.6.0 +pyqt6-sip==13.8.0 # via pyqt6 pyside2==5.13.2 # via diff --git a/requirements/constraints_py3.12_pydantic_1.txt b/requirements/constraints_py3.12_pydantic_1.txt index 9a2fb717d..a271e2224 100644 --- a/requirements/constraints_py3.12_pydantic_1.txt +++ b/requirements/constraints_py3.12_pydantic_1.txt @@ -39,7 +39,7 @@ cloudpickle==3.0.0 # via dask comm==0.2.2 # via ipykernel -coverage==7.5.4 +coverage==7.6.0 # via partseg (pyproject.toml) czifile==2019.7.2 # via partseg (pyproject.toml) @@ -141,7 +141,7 @@ magicgui==0.8.3 # via # partseg (pyproject.toml) # napari -mahotas==1.4.15 +mahotas==1.4.17 # via partseg (pyproject.toml) markdown-it-py==3.0.0 # via rich @@ -173,7 +173,7 @@ npe2==0.7.6 # via # -r requirements/version_denylist.txt # napari -numpy==1.26.4 +numpy==2.0.0 # via # partseg (pyproject.toml) # czifile @@ -233,7 +233,7 @@ pillow==10.4.0 # imageio # napari # scikit-image -pint==0.24.1 +pint==0.24.3 # via napari platformdirs==4.2.2 # via @@ -297,7 +297,7 @@ pyqt6==6.7.0 # via partseg (pyproject.toml) pyqt6-qt6==6.7.2 # via pyqt6 -pyqt6-sip==13.6.0 +pyqt6-sip==13.8.0 # via pyqt6 pyside2==5.13.2 # via diff --git a/requirements/constraints_py3.8.txt b/requirements/constraints_py3.8.txt index 4c99c9bf8..9b062d699 100644 --- a/requirements/constraints_py3.8.txt +++ b/requirements/constraints_py3.8.txt @@ -42,7 +42,7 @@ cloudpickle==3.0.0 # via dask comm==0.2.2 # via ipykernel -coverage==7.5.4 +coverage==7.6.0 # via partseg (pyproject.toml) czifile==2019.7.2 # via partseg (pyproject.toml) @@ -60,7 +60,7 @@ docutils==0.20.1 # via sphinx et-xmlfile==1.1.0 # via openpyxl -exceptiongroup==1.2.1 +exceptiongroup==1.2.2 # via pytest executing==2.0.1 # via stack-data @@ -155,7 +155,7 @@ magicgui==0.8.3 # via # partseg (pyproject.toml) # napari -mahotas==1.4.15 +mahotas==1.4.17 # via partseg (pyproject.toml) markdown-it-py==3.0.0 # via rich @@ -319,7 +319,7 @@ pyqt6==6.7.0 # via partseg (pyproject.toml) pyqt6-qt6==6.7.2 # via pyqt6 -pyqt6-sip==13.6.0 +pyqt6-sip==13.8.0 # via pyqt6 pyside2==5.15.2.1 # via diff --git a/requirements/constraints_py3.8_pydantic_1.txt b/requirements/constraints_py3.8_pydantic_1.txt index f9fac9ef0..65efdaf77 100644 --- a/requirements/constraints_py3.8_pydantic_1.txt +++ b/requirements/constraints_py3.8_pydantic_1.txt @@ -40,7 +40,7 @@ cloudpickle==3.0.0 # via dask comm==0.2.2 # via ipykernel -coverage==7.5.4 +coverage==7.6.0 # via partseg (pyproject.toml) czifile==2019.7.2 # via partseg (pyproject.toml) @@ -58,7 +58,7 @@ docutils==0.20.1 # via sphinx et-xmlfile==1.1.0 # via openpyxl -exceptiongroup==1.2.1 +exceptiongroup==1.2.2 # via pytest executing==2.0.1 # via stack-data @@ -153,7 +153,7 @@ magicgui==0.8.3 # via # partseg (pyproject.toml) # napari -mahotas==1.4.15 +mahotas==1.4.17 # via partseg (pyproject.toml) markdown-it-py==3.0.0 # via rich @@ -316,7 +316,7 @@ pyqt6==6.7.0 # via partseg (pyproject.toml) pyqt6-qt6==6.7.2 # via pyqt6 -pyqt6-sip==13.6.0 +pyqt6-sip==13.8.0 # via pyqt6 pyside2==5.15.2.1 # via diff --git a/requirements/constraints_py3.9.txt b/requirements/constraints_py3.9.txt index 608830dc2..a31ed7633 100644 --- a/requirements/constraints_py3.9.txt +++ b/requirements/constraints_py3.9.txt @@ -4,8 +4,6 @@ alabaster==0.7.16 # via sphinx altgraph==0.17.4 # via pyinstaller -annotated-types==0.7.0 - # via pydantic app-model==0.2.7 # via napari appdirs==1.4.4 @@ -41,7 +39,7 @@ cloudpickle==3.0.0 # via dask comm==0.2.2 # via ipykernel -coverage==7.5.4 +coverage==7.6.0 # via partseg (pyproject.toml) czifile==2019.7.2 # via partseg (pyproject.toml) @@ -55,11 +53,11 @@ defusedxml==0.7.1 # via partseg (pyproject.toml) docstring-parser==0.16 # via magicgui -docutils==0.21.2 +docutils==0.17.1 # via sphinx et-xmlfile==1.1.0 # via openpyxl -exceptiongroup==1.2.1 +exceptiongroup==1.2.2 # via # ipython # pytest @@ -119,7 +117,9 @@ ipython==8.18.1 jedi==0.19.1 # via ipython jinja2==3.1.4 - # via sphinx + # via + # numpydoc + # sphinx jsonschema==4.23.0 # via napari jsonschema-specifications==2023.12.1 @@ -155,7 +155,7 @@ magicgui==0.8.3 # via # partseg (pyproject.toml) # napari -mahotas==1.4.15 +mahotas==1.4.17 # via partseg (pyproject.toml) markdown-it-py==3.0.0 # via rich @@ -169,7 +169,7 @@ mdurl==0.1.2 # via markdown-it-py mpmath==1.3.0 # via sympy -napari==0.5.0 +napari==0.4.18 # via partseg (pyproject.toml) napari-console==0.0.9 # via napari @@ -187,7 +187,7 @@ npe2==0.7.6 # via # -r requirements/version_denylist.txt # napari -numpy==1.26.4 +numpy==2.0.0 # via # partseg (pyproject.toml) # czifile @@ -205,7 +205,7 @@ numpy==1.26.4 # scipy # tifffile # vispy -numpydoc==1.7.0 +numpydoc==1.5.0 # via napari oiffile==2024.5.24 # via partseg (pyproject.toml) @@ -247,7 +247,7 @@ pillow==10.4.0 # imageio # napari # scikit-image -pint==0.24.1 +pint==0.24.3 # via napari platformdirs==4.2.2 # via @@ -278,7 +278,7 @@ pure-eval==0.2.2 # via stack-data pyconify==0.1.6 # via superqt -pydantic==2.8.2 +pydantic==1.10.17 # via # partseg (pyproject.toml) # app-model @@ -287,8 +287,6 @@ pydantic==2.8.2 # pydantic-compat pydantic-compat==0.1.2 # via app-model -pydantic-core==2.20.1 - # via pydantic pygments==2.18.0 # via # partseg (pyproject.toml) @@ -312,7 +310,7 @@ pyqt6==6.7.0 # via partseg (pyproject.toml) pyqt6-qt6==6.7.2 # via pyqt6 -pyqt6-sip==13.6.0 +pyqt6-sip==13.8.0 # via pyqt6 pyside2==5.15.2.1 # via @@ -421,8 +419,10 @@ six==1.16.0 # python-dateutil snowballstemmer==2.2.0 # via sphinx -sphinx==7.3.7 - # via numpydoc +sphinx==4.5.0 + # via + # napari + # numpydoc sphinxcontrib-applehelp==1.0.8 # via sphinx sphinxcontrib-devhelp==1.0.6 @@ -444,8 +444,6 @@ superqt==0.6.7 # napari sympy==1.13.0 # via partseg (pyproject.toml) -tabulate==0.9.0 - # via numpydoc tifffile==2024.7.2 # via # partseg (pyproject.toml) @@ -457,9 +455,7 @@ tomli==2.0.1 # via # build # npe2 - # numpydoc # pytest - # sphinx tomli-w==1.0.0 # via npe2 toolz==0.12.1 @@ -496,7 +492,6 @@ typing-extensions==4.12.2 # napari # pint # pydantic - # pydantic-core # superqt # typer tzdata==2024.1 @@ -505,7 +500,7 @@ urllib3==2.2.2 # via # requests # sentry-sdk -vispy==0.14.3 +vispy==0.12.2 # via # partseg (pyproject.toml) # napari diff --git a/requirements/constraints_py3.9_pydantic_1.txt b/requirements/constraints_py3.9_pydantic_1.txt index c83ac22ec..18aca573a 100644 --- a/requirements/constraints_py3.9_pydantic_1.txt +++ b/requirements/constraints_py3.9_pydantic_1.txt @@ -39,7 +39,7 @@ cloudpickle==3.0.0 # via dask comm==0.2.2 # via ipykernel -coverage==7.5.4 +coverage==7.6.0 # via partseg (pyproject.toml) czifile==2019.7.2 # via partseg (pyproject.toml) @@ -53,11 +53,11 @@ defusedxml==0.7.1 # via partseg (pyproject.toml) docstring-parser==0.16 # via magicgui -docutils==0.21.2 +docutils==0.17.1 # via sphinx et-xmlfile==1.1.0 # via openpyxl -exceptiongroup==1.2.1 +exceptiongroup==1.2.2 # via # ipython # pytest @@ -117,7 +117,9 @@ ipython==8.18.1 jedi==0.19.1 # via ipython jinja2==3.1.4 - # via sphinx + # via + # numpydoc + # sphinx jsonschema==4.23.0 # via napari jsonschema-specifications==2023.12.1 @@ -153,7 +155,7 @@ magicgui==0.8.3 # via # partseg (pyproject.toml) # napari -mahotas==1.4.15 +mahotas==1.4.17 # via partseg (pyproject.toml) markdown-it-py==3.0.0 # via rich @@ -167,7 +169,7 @@ mdurl==0.1.2 # via markdown-it-py mpmath==1.3.0 # via sympy -napari==0.5.0 +napari==0.4.18 # via partseg (pyproject.toml) napari-console==0.0.9 # via napari @@ -185,7 +187,7 @@ npe2==0.7.6 # via # -r requirements/version_denylist.txt # napari -numpy==1.26.4 +numpy==2.0.0 # via # partseg (pyproject.toml) # czifile @@ -203,7 +205,7 @@ numpy==1.26.4 # scipy # tifffile # vispy -numpydoc==1.7.0 +numpydoc==1.5.0 # via napari oiffile==2024.5.24 # via partseg (pyproject.toml) @@ -245,7 +247,7 @@ pillow==10.4.0 # imageio # napari # scikit-image -pint==0.24.1 +pint==0.24.3 # via napari platformdirs==4.2.2 # via @@ -309,7 +311,7 @@ pyqt6==6.7.0 # via partseg (pyproject.toml) pyqt6-qt6==6.7.2 # via pyqt6 -pyqt6-sip==13.6.0 +pyqt6-sip==13.8.0 # via pyqt6 pyside2==5.15.2.1 # via @@ -418,8 +420,10 @@ six==1.16.0 # python-dateutil snowballstemmer==2.2.0 # via sphinx -sphinx==7.3.7 - # via numpydoc +sphinx==4.5.0 + # via + # napari + # numpydoc sphinxcontrib-applehelp==1.0.8 # via sphinx sphinxcontrib-devhelp==1.0.6 @@ -441,8 +445,6 @@ superqt==0.6.7 # napari sympy==1.13.0 # via partseg (pyproject.toml) -tabulate==0.9.0 - # via numpydoc tifffile==2024.7.2 # via # partseg (pyproject.toml) @@ -454,9 +456,7 @@ tomli==2.0.1 # via # build # npe2 - # numpydoc # pytest - # sphinx tomli-w==1.0.0 # via npe2 toolz==0.12.1 @@ -501,7 +501,7 @@ urllib3==2.2.2 # via # requests # sentry-sdk -vispy==0.14.3 +vispy==0.12.2 # via # partseg (pyproject.toml) # napari