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Illumina profile missing ABCG2 config #85

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aroon-color opened this issue Nov 25, 2024 · 1 comment
Open

Illumina profile missing ABCG2 config #85

aroon-color opened this issue Nov 25, 2024 · 1 comment

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@aroon-color
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aroon-color commented Nov 25, 2024 •
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aldy/aldy/resources/profiles/illumina.yml

Line 3 in 0849a25

CFTR:

ABGC2 wasn't added to the Illumina config so despite the updated config in v4.7, it's not accessible.


🐿  Aldy v4.7 (Python 3.10.15 on Linux 5.15.0-1063-aws-x86_64-with-glibc2.31)
   (c) 2016-2024 Aldy Authors. All rights reserved.
   Free for non-commercial/academic use only.
Genotyping sample TEST.cram...
ERROR: gene= abcg2, profile= illumina, file= validation_data/TEST.cram
Profile missing ABCG2
@aroon-color aroon-color mentioned this issue Nov 25, 2024
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@rrdavis77
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This is also true for RYR1 and CACNA15

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@rrdavis77 @aroon-color